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    BRCC36B Mov34/MPN/PAD-1 family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819866, updated on 18-Sep-2024

    Summary

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    Official Symbol
    BRCC36B
    Official Full Name
    Mov34/MPN/PAD-1 family protein
    Primary source
    TAIR:AT3G06820
    Locus tag
    AT3G06820
    See related
    Araport:AT3G06820
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtBRCC36B; BRCA1/BRCA2-containing complex 36 homolog B
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    Genomic context

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    See BRCC36B in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    10
    Sequence:
    Chromosome: 3; NC_003074.8 (2150823..2156073, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene glycine-rich protein Neighboring gene ncRNA Neighboring gene plastid developmental protein DAG Neighboring gene acyl-CoA dehydrogenase-like protein Neighboring gene Plant invertase/pectin methylesterase inhibitor superfamily Neighboring gene uncharacterized protein Neighboring gene 2-oxoacid dehydrogenases acyltransferase family protein Neighboring gene multifunctional protein 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. BRCC36A is epistatic to BRCA1 in DNA crosslink repair and homologous recombination in Arabidopsis thaliana. Block-Schmidt AS, et al. Nucleic Acids Res, 2011 Jan. PMID 20817926, Free PMC Article
    2. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article
    3. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001084649.2
    NM_001337678.1
    NM_111562.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables cysteine-type deubiquitinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metallopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within DNA repair IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of BRISC complex IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Mov34/MPN/PAD-1 family protein
    NP_001319488.1
    • Mov34/MPN/PAD-1 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555); BEST Arabidopsis thaliana protein match is: Mov34/MPN/PAD-1 family protein (TAIR:AT1G80210.1); Has 1006 Blast hits to 928 proteins in 230 species: Archae - 0; Bacteria - 7; Metazoa - 464; Fungi - 225; Plants - 185; Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink).
    NP_187338.3
    • Mov34/MPN/PAD-1 family protein; CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555); BEST Arabidopsis thaliana protein match is: Mov34/MPN/PAD-1 family protein (TAIR:AT1G80210.1); Has 413 Blast hits to 335 proteins in 124 species: Archae - 0; Bacteria - 0; Metazoa - 191; Fungi - 75; Plants - 96; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      2150823..2156073 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_111562.5 → NP_187338.3  Mov34/MPN/PAD-1 family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_187338.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VDA3, A8MRH7
      Conserved Domains (1) summary
      cl13996
      Location:1 → 282
      MPN; Mpr1p, Pad1p N-terminal (MPN) domains

    2. NM_001337678.1 → NP_001319488.1  Mov34/MPN/PAD-1 family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4JC55, Q8RY58
      Conserved Domains (1) summary
      cd08068
      Location:3 → 363
      MPN_BRCC36; Mov34/MPN/PAD-1 family: BRCC36, a subunit of BRCA1-A complex

    3. NM_001084649.2 → NP_001078118.1  Mov34/MPN/PAD-1 family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001078118.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4JC55, Q8RY58
      Conserved Domains (1) summary
      cd08068
      Location:3 → 363
      MPN_BRCC36; Mov34/MPN/PAD-1 family: BRCC36, a subunit of BRCA1-A complex
    Nucleotide Protein
    Heading Accession and Version

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