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    ttc33 tetratricopeptide repeat domain 33 [ Danio rerio (zebrafish) ]

    Gene ID: 436995, updated on 4-Jan-2025

    Summary

    Official Symbol
    ttc33provided by ZNC
    Official Full Name
    tetratricopeptide repeat domain 33provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-040718-480
    See related
    Ensembl:ENSDARG00000035406 AllianceGenome:ZFIN:ZDB-GENE-040718-480
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    fb38g05; zgc:86619; wu:fb38g05
    Summary
    Orthologous to human TTC33 (tetratricopeptide repeat domain 33). [provided by Alliance of Genome Resources, Jan 2025]
    Orthologs
    NEW
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    Genomic context

    See ttc33 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 5 NC_007116.7 (35421771..35456254, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 5 NC_007116.6 (34821618..34856101, complement)

    Chromosome 5 - NC_007116.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101886116 Neighboring gene prostaglandin E receptor 4 (subtype EP4) b Neighboring gene fructose-1,6-bisphosphatase 1b Neighboring gene ER lipid raft associated 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Markers

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    tetratricopeptide repeat protein 33
    Names
    TPR repeat protein 33

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001002722.1NP_001002722.1  tetratricopeptide repeat protein 33

      See identical proteins and their annotated locations for NP_001002722.1

      Status: PROVISIONAL

      Source sequence(s)
      BC075750
      UniProtKB/Swiss-Prot
      Q6DI40
      Related
      ENSDARP00000051311.3, ENSDART00000051312.4
      Conserved Domains (2) summary
      sd00006
      Location:6388
      TPR; TPR repeat [structural motif]
      pfam13414
      Location:59125
      TPR_11; TPR repeat

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007116.7 Reference GRCz11 Primary Assembly

      Range
      35421771..35456254 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018394591.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      251815..286298 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)