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    CG11248 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 40411, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG11248provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0037117
    Locus tag
    Dmel_CG11248
    See related
    AllianceGenome:FB:FBgn0037117
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG11248
    Summary
    Is expressed in several structures, including central brain primordium; ganglia; larval nervous system; midline primordium; and ventral nerve cord primordium. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG11248 in Genome Data Viewer
    Location:
    78E3-78E4; 3-47 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (21680050..21683231)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (21673150..21676331)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene antisense RNA:CR43979 Neighboring gene Amyotrophic lateral sclerosis 2 Neighboring gene long non-coding RNA:CR43978 Neighboring gene Seminal fluid protein 78E Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Endogenous transcripts direct microRNA degradation in Drosophila, and this targeted degradation is required for proper embryonic development. Kingston ER, et al. Mol Cell, 2022 Oct 20. PMID 36150386, Free PMC Article
    2. A genomic analysis of Drosophila somatic sexual differentiation and its regulation. Arbeitman MN, et al. Development, 2004 May. PMID 15056610
    3. Gene expression profiling of the developing Drosophila CNS midline cells. Kearney JB, et al. Dev Biol, 2004 Nov 15. PMID 15501232, Free PMC Article
    4. Drosophila muller f elements maintain a distinct set of genomic properties over 40 million years of evolution. Leung W, et al. G3 (Bethesda), 2015 Mar 4. PMID 25740935, Free PMC Article
    5. Putative synaptic genes defined from a Drosophila whole body developmental transcriptome by a machine learning approach. Pazos Obregón F, et al. BMC Genomics, 2015 Sep 15. PMID 26370122, Free PMC Article

    See all (24) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG11248-PA
    CG11248-PB
    CG11248-PC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      21680050..21683231
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001275257.1 → NP_001262186.1  uncharacterized protein Dmel_CG11248, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001262186.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VNZ7
      Conserved Domains (2) summary
      COG1196
      Location:288 → 640
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:148 → 413
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    2. NM_141091.2 → NP_649348.1  uncharacterized protein Dmel_CG11248, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_649348.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VNZ7
      Related
      FBpp0078085
      Conserved Domains (2) summary
      COG1196
      Location:288 → 640
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:148 → 413
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    3. NM_168934.2 → NP_730678.1  uncharacterized protein Dmel_CG11248, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_730678.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VNZ7
      Related
      FBpp0078084
      Conserved Domains (2) summary
      COG1196
      Location:288 → 640
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:148 → 413
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VNZ7 Q9VNZ7

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