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    Shawl Shaw-like [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 5740840, updated on 9-Dec-2024

    Summary

    Official Symbol
    Shawlprovided by FlyBase
    Official Full Name
    Shaw-likeprovided by FlyBase
    Primary source
    FLYBASE:FBgn0085395
    Locus tag
    Dmel_CG34366
    See related
    AllianceGenome:FB:FBgn0085395
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG13111; CG34366; CG4450; Dmel\CG34366; Kv3; Kv3.2; shawl
    Old locus tag
    CG13111; CG4450; Dmel_CG13111; Dmel_CG4450
    Summary
    Predicted to enable delayed rectifier potassium channel activity. Predicted to be involved in action potential and potassium ion transmembrane transport. Predicted to be located in membrane. Predicted to be part of voltage-gated potassium channel complex. Predicted to be active in several cellular components, including dendrite membrane; neuronal cell body membrane; and synaptic membrane. Is expressed in adult head. Human ortholog(s) of this gene implicated in developmental and epileptic encephalopathy 103. Orthologous to human KCNC2 (potassium voltage-gated channel subfamily C member 2) and KCNC4 (potassium voltage-gated channel subfamily C member 4). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See Shawl in Genome Data Viewer
    Location:
    30B1-30B2; 2-35 cM
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (9370309..9415156, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (9370309..9415156, complement)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR43404 Neighboring gene antisense RNA:CR43865 Neighboring gene uncharacterized protein Neighboring gene Aldehyde dehydrogenase Neighboring gene uncharacterized protein Neighboring gene Multicopper oxidase 1 Neighboring gene uncharacterized protein Neighboring gene Fat body protein 2

    Genomic regions, transcripts, and products

    General gene information

    mobile_element

    • Loc: c9396462-9393554 mobile_element_type = transposon:jockey{}332

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables delayed rectifier potassium channel activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables voltage-gated monoatomic cation channel activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables voltage-gated potassium channel activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in action potential IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in potassium ion transmembrane transport IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in potassium ion transport IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in potassium ion transport ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in protein homooligomerization IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in axon terminus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in dendrite membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in neuronal cell body membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in postsynaptic membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in presynaptic membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of voltage-gated potassium channel complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of voltage-gated potassium channel complex IEA
    Inferred from Electronic Annotation
    more info
     
    part_of voltage-gated potassium channel complex ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    General protein information

    Preferred Names
    Shaw-like
    Names
    CG34366-PC
    CG34366-PD
    Shawl-PC
    Shawl-PD

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      9370309..9415156 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_135440.2NP_609284.3  Shaw-like, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_609284.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      R9PY39
      Conserved Domains (4) summary
      smart00225
      Location:799
      BTB; Broad-Complex, Tramtrack and Bric a brac
      pfam00520
      Location:307506
      Ion_trans; Ion transport protein
      pfam02214
      Location:797
      BTB_2; BTB/POZ domain
      pfam07885
      Location:449499
      Ion_trans_2; Ion channel
    2. NM_001103661.3NP_001097131.2  Shaw-like, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001097131.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A8DYR5
      Conserved Domains (4) summary
      smart00225
      Location:799
      BTB; Broad-Complex, Tramtrack and Bric a brac
      pfam00520
      Location:307506
      Ion_trans; Ion transport protein
      pfam02214
      Location:797
      BTB_2; BTB/POZ domain
      pfam07885
      Location:449499
      Ion_trans_2; Ion channel