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    NCLIV_068580 hypothetical protein [ Neospora caninum Liverpool ]

    Gene ID: 13445656, updated on 26-Oct-2024

    Summary

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    Gene symbol
    NCLIV_068580
    Gene description
    hypothetical protein
    Locus tag
    NCLIV_068580
    See related
    ToxoDB:NCLIV_068580; VEuPathDB:NCLIV_068580
    Gene type
    protein coding
    RNA name
    hypothetical protein
    RefSeq status
    PROVISIONAL
    Organism
    Neospora caninum Liverpool (strain: Liverpool)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Sarcocystidae; Neospora
    Orthologs
    Toxoplasma gondii all
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    Genomic context

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    See NCLIV_068580 in Genome Data Viewer
    Location:
    chromosome: XII
    Exon count:
    10
    Sequence:
    Chromosome: XII; NC_018398.1 (6387494..6393091, complement)

    Chromosome XII - NC_018398.1Genomic Context describing neighboring genes Neighboring gene putative isoleucyl-tRNA synthetase Neighboring gene putative Fe-S metabolism associated domain-containing protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_018398.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables SNARE binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in COPII-coated vesicle cargo loading IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of COPII vesicle coat IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endoplasmic reticulum exit site IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    hypothetical protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_018398.1 Reference assembly

      Range
      6387494..6393091 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003886410.1 → XP_003886459.1  hypothetical protein NCLIV_068580 [Neospora caninum Liverpool]

      See identical proteins and their annotated locations for XP_003886459.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      F0VRT6
      Conserved Domains (4) summary
      pfam04815
      Location:300 → 417
      Sec23_helical; Sec23/Sec24 helical domain
      pfam08033
      Location:189 → 285
      Sec23_BS; Sec23/Sec24 beta-sandwich domain
      cl00057
      Location:21 → 188
      vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
      cl15697
      Location:448 → 486
      ADF_gelsolin; Actin depolymerization factor/cofilin- and gelsolin-like domains
    Nucleotide Protein
    Heading Accession and Version

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