U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Nucleotide

    • Showing Current items.

    CSNK2A1 casein kinase 2 alpha 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 714841, updated on 5-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    CSNK2A1
    Gene description
    casein kinase 2 alpha 1
    See related
    Ensembl:ENSMMUG00000031224
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CSNK2A1 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 10 NC_041763.1 (66018610..66082026)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 10 NC_027902.1 (33240039..33303475, complement)

    Chromosome 10 - NC_041763.1Genomic Context describing neighboring genes Neighboring gene transcription factor 15 Neighboring gene U7 small nuclear RNA Neighboring gene TBC1 domain family member 20 Neighboring gene RANBP2-type and C3HC4-type zinc finger containing 1

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of protein kinase CK2 complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    casein kinase II subunit alpha
    NP_001247806.1
    XP_015004779.1
    XP_015004780.1
    XP_015004781.1
    XP_028683210.1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001260877.1 → NP_001247806.1  casein kinase II subunit alpha

      See identical proteins and their annotated locations for NP_001247806.1

      Status: PROVISIONAL

      Source sequence(s)
      JV046251
      UniProtKB/TrEMBL
      A0A1D5RL05, F7CKR9, F7CKT2
      Related
      ENSMMUP00000037659.3, ENSMMUT00000044635.3
      Conserved Domains (1) summary
      cd14132
      Location:20 → 325
      STKc_CK2_alpha; Catalytic subunit (alpha) of the Serine/Threonine Kinase, Casein Kinase 2

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041763.1 Reference Mmul_10 Primary Assembly

      Range
      66018610..66082026
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015149295.2 → XP_015004781.1  casein kinase II subunit alpha isoform X2

      UniProtKB/TrEMBL
      F7CKR9
      Conserved Domains (1) summary
      cd14132
      Location:1 → 189
      STKc_CK2_alpha; Catalytic subunit (alpha) of the Serine/Threonine Kinase, Casein Kinase 2

    2. XM_015149293.2 → XP_015004779.1  casein kinase II subunit alpha isoform X1

      UniProtKB/TrEMBL
      A0A1D5RL05, F7CKR9, F7CKT2
      Related
      ENSMMUP00000037657.2, ENSMMUT00000044633.3
      Conserved Domains (1) summary
      cd14132
      Location:20 → 325
      STKc_CK2_alpha; Catalytic subunit (alpha) of the Serine/Threonine Kinase, Casein Kinase 2

    3. XM_015149294.2 → XP_015004780.1  casein kinase II subunit alpha isoform X2

      UniProtKB/TrEMBL
      F7CKR9
      Conserved Domains (1) summary
      cd14132
      Location:1 → 189
      STKc_CK2_alpha; Catalytic subunit (alpha) of the Serine/Threonine Kinase, Casein Kinase 2

    4. XM_028827377.1 → XP_028683210.1  casein kinase II subunit alpha isoform X2

      Conserved Domains (1) summary
      cd14132
      Location:1 → 189
      STKc_CK2_alpha; Catalytic subunit (alpha) of the Serine/Threonine Kinase, Casein Kinase 2
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.