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    SMPDL3A sphingomyelin phosphodiesterase acid like 3A [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 713696, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SMPDL3Aprovided by VGNC
    Official Full Name
    sphingomyelin phosphodiesterase acid like 3Aprovided by VGNC
    Primary source
    VGNC:VGNC:77731
    See related
    Ensembl:ENSMMUG00000054098
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SMPDL3A in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 4 NC_041757.1 (26326395..26347802)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 4 NC_027896.1 (144883554..144904882, complement)

    Chromosome 4 - NC_041757.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106998163 Neighboring gene fatty acid binding protein 7 Neighboring gene clavesin 2 Neighboring gene triadin

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables sphingomyelin phosphodiesterase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in sphingomyelin catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    acid sphingomyelinase-like phosphodiesterase 3a

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041757.1 Reference Mmul_10 Primary Assembly

      Range
      26326395..26347802
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001108274.4 → XP_001108274.1  acid sphingomyelinase-like phosphodiesterase 3a isoform X1

      UniProtKB/TrEMBL
      A0A5F8A9W2, G7MQL5
      Related
      ENSMMUP00000073751.1, ENSMMUT00000101506.1
      Conserved Domains (2) summary
      cd00842
      Location:40 → 336
      MPP_ASMase; acid sphingomyelinase and related proteins, metallophosphatase domain
      pfam00149
      Location:76 → 297
      Metallophos; Calcineurin-like phosphoesterase

    2. XM_028847069.1 → XP_028702902.1  acid sphingomyelinase-like phosphodiesterase 3a isoform X2

      Conserved Domains (1) summary
      cd00842
      Location:1 → 232
      MPP_ASMase; acid sphingomyelinase and related proteins, metallophosphatase domain
    Nucleotide Protein
    Heading Accession and Version

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