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    PDS5B PDS5 cohesin associated factor B [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 721999, updated on 17-Aug-2024

    Summary

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    Official Symbol
    PDS5Bprovided by VGNC
    Official Full Name
    PDS5 cohesin associated factor Bprovided by VGNC
    Primary source
    VGNC:VGNC:75835
    See related
    Ensembl:ENSMMUG00000007201
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See PDS5B in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    35
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 17 NC_041770.1 (11578163..11767085)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 17 NC_027909.1 (12107097..12296445)

    Chromosome 17 - NC_041770.1Genomic Context describing neighboring genes Neighboring gene NEDD4 binding protein 2 like 2 Neighboring gene MICOS complex subunit MIC10 pseudogene Neighboring gene uncharacterized LOC114673602 Neighboring gene 40S ribosomal protein S15a-like Neighboring gene uncharacterized LOC114673537 Neighboring gene uncharacterized LOC114673536

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in DNA repair IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mitotic sister chromatid cohesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of chromatin IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sister chromatid cohesion protein PDS5 homolog B
    Names
    PDS5, regulator of cohesion maintenance, homolog B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041770.1 Reference Mmul_10 Primary Assembly

      Range
      11578163..11767085
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015120858.2 → XP_014976344.1  sister chromatid cohesion protein PDS5 homolog B isoform X2

      UniProtKB/TrEMBL
      F7EQ66, H9FRM2, H9Z6N1
      Related
      ENSMMUP00000009451.4, ENSMMUT00000010067.4
      Conserved Domains (3) summary
      sd00044
      Location:240 → 261
      HEAT; HEAT repeat [structural motif]
      cl26789
      Location:250 → 461
      Toprim_N; DNA primase catalytic core, N-terminal domain
      cl27000
      Location:1175 → 1403
      TFIIFa; Transcription initiation factor IIF, alpha subunit, N-terminal region of RAP74. Subunit of transcription initiation complex involved in initiation, elongation and promoter escape.Tetramer of 2 alpha and 2 beta TFIIF subunits interacts directly with RNA ...

    2. XM_015120857.2 → XP_014976343.1  sister chromatid cohesion protein PDS5 homolog B isoform X1

      UniProtKB/TrEMBL
      H9FRM2
      Related
      ENSMMUP00000058666.2, ENSMMUT00000075268.2
      Conserved Domains (2) summary
      sd00044
      Location:240 → 261
      HEAT; HEAT repeat [structural motif]
      cd19953
      Location:31 → 661
      PDS5; Sister chromatid cohesion protein PDS5

    3. XM_015120861.2 → XP_014976347.1  sister chromatid cohesion protein PDS5 homolog B isoform X5

      UniProtKB/TrEMBL
      A0A5F8AJT7, H9FRM2
      Related
      ENSMMUP00000078184.1, ENSMMUT00000109436.1
      Conserved Domains (3) summary
      sd00044
      Location:240 → 261
      HEAT; HEAT repeat [structural motif]
      cl25751
      Location:1042 → 1295
      DUF4045; Domain of unknown function (DUF4045)
      cl26789
      Location:250 → 461
      Toprim_N; DNA primase catalytic core, N-terminal domain

    4. XM_015120859.2 → XP_014976345.1  sister chromatid cohesion protein PDS5 homolog B isoform X3

      UniProtKB/TrEMBL
      H9FRM2
      Conserved Domains (3) summary
      sd00044
      Location:240 → 261
      HEAT; HEAT repeat [structural motif]
      cl26789
      Location:250 → 461
      Toprim_N; DNA primase catalytic core, N-terminal domain
      cl27000
      Location:1175 → 1402
      TFIIFa; Transcription initiation factor IIF, alpha subunit, N-terminal region of RAP74. Subunit of transcription initiation complex involved in initiation, elongation and promoter escape.Tetramer of 2 alpha and 2 beta TFIIF subunits interacts directly with RNA ...

    5. XM_015120860.2 → XP_014976346.1  sister chromatid cohesion protein PDS5 homolog B isoform X4

      UniProtKB/TrEMBL
      H9FRM2, H9Z6N2
      Conserved Domains (3) summary
      sd00044
      Location:240 → 261
      HEAT; HEAT repeat [structural motif]
      cl26789
      Location:250 → 461
      Toprim_N; DNA primase catalytic core, N-terminal domain
      cl27000
      Location:1175 → 1401
      TFIIFa; Transcription initiation factor IIF, alpha subunit, N-terminal region of RAP74. Subunit of transcription initiation complex involved in initiation, elongation and promoter escape.Tetramer of 2 alpha and 2 beta TFIIF subunits interacts directly with RNA ...
    Nucleotide Protein
    Heading Accession and Version

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