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    JUP junction plakoglobin [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 707769, updated on 17-Aug-2024

    Summary

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    Official Symbol
    JUPprovided by VGNC
    Official Full Name
    junction plakoglobinprovided by VGNC
    Primary source
    VGNC:VGNC:73960
    Locus tag
    EGK_08712
    See related
    Ensembl:ENSMMUG00000013048
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See JUP in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 16 NC_041769.1 (52865601..52898466, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 16 NC_027908.1 (47583985..47616497, complement)

    Chromosome 16 - NC_041769.1Genomic Context describing neighboring genes Neighboring gene gastrin Neighboring gene huntingtin associated protein 1 Neighboring gene prolyl 3-hydroxylase family member 4 (inactive) Neighboring gene FKBP prolyl isomerase 10 Neighboring gene 5'-nucleotidase, cytosolic IIIB

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables alpha-catenin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables cadherin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein phosphatase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription coactivator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in adherens junction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of catenin complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    junction plakoglobin
    Names
    Desmoplakin-3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001266127.2 → NP_001253056.1  junction plakoglobin

      See identical proteins and their annotated locations for NP_001253056.1

      Status: PROVISIONAL

      Source sequence(s)
      JV045291
      UniProtKB/TrEMBL
      A0A8J8YGS1, F7H7V0, G7NIJ3, H9EQ90
      Related
      ENSMMUP00000017143.3, ENSMMUT00000018312.4
      Conserved Domains (4) summary
      smart00185
      Location:341 → 381
      ARM; Armadillo/beta-catenin-like repeats
      PLN03200
      Location:328 → 658
      PLN03200; cellulose synthase-interactive protein; Provisional
      sd00043
      Location:393 → 418
      ARM; armadillo repeat [structural motif]
      pfam00514
      Location:221 → 253
      Arm; Armadillo/beta-catenin-like repeat

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041769.1 Reference Mmul_10 Primary Assembly

      Range
      52865601..52898466 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028835551.1 → XP_028691384.1  junction plakoglobin isoform X1

      UniProtKB/TrEMBL
      F7H7V0
      Conserved Domains (3) summary
      smart00185
      Location:341 → 381
      ARM; Armadillo/beta-catenin-like repeats
      PLN03200
      Location:328 → 658
      PLN03200; cellulose synthase-interactive protein; Provisional
      sd00043
      Location:393 → 418
      ARM; armadillo repeat [structural motif]

    2. XM_015119572.2 → XP_014975058.2  junction plakoglobin isoform X1

      UniProtKB/TrEMBL
      F7H7V0
      Conserved Domains (3) summary
      smart00185
      Location:341 → 381
      ARM; Armadillo/beta-catenin-like repeats
      PLN03200
      Location:328 → 658
      PLN03200; cellulose synthase-interactive protein; Provisional
      sd00043
      Location:393 → 418
      ARM; armadillo repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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