U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Nucleotide

    • Showing Current items.

    PLGRKT plasminogen receptor with a C-terminal lysine [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 693286, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    PLGRKTprovided by VGNC
    Official Full Name
    plasminogen receptor with a C-terminal lysineprovided by VGNC
    Primary source
    VGNC:VGNC:76098
    See related
    Ensembl:ENSMMUG00000006197
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    C9orf46; C15H9orf46
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See PLGRKT in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 15 NC_041768.1 (78342278..78417380)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 15 NC_027907.1 (79006020..79018002) , (79077448..79081285)

    Chromosome 15 - NC_041768.1Genomic Context describing neighboring genes Neighboring gene programmed cell death 1 ligand 2 Neighboring gene uncharacterized LOC114672797 Neighboring gene CD274 molecule Neighboring gene uncharacterized LOC114672798 Neighboring gene E3 ubiquitin-protein ligase RNF152-like Neighboring gene ADP-ribosylation factor-like protein 6-interacting protein 1 pseudogene Neighboring gene non-histone chromosomal protein HMG-17 pseudogene

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in positive regulation of plasminogen activation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    plasminogen receptor (KT)
    Names
    transmembrane protein C9orf46

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001257744.1 → NP_001244673.1  plasminogen receptor (KT)

      See identical proteins and their annotated locations for NP_001244673.1

      Status: PROVISIONAL

      Source sequence(s)
      JU322534
      UniProtKB/TrEMBL
      F7HNT6, G8F1V2
      Related
      ENSMMUP00000008147.1, ENSMMUT00000008670.3
      Conserved Domains (1) summary
      pfam10166
      Location:1 → 134
      DUF2368; Uncharacterized conserved protein (DUF2368)

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041768.1 Reference Mmul_10 Primary Assembly

      Range
      78342278..78417380
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028834207.1 → XP_028690040.1  plasminogen receptor (KT) isoform X1

      UniProtKB/TrEMBL
      F7HNT6, G8F1V2
      Conserved Domains (1) summary
      pfam10166
      Location:1 → 134
      DUF2368; Uncharacterized conserved protein (DUF2368)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.