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    POMGNT1 protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 707205, updated on 17-Aug-2024

    Summary

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    Official Symbol
    POMGNT1provided by VGNC
    Official Full Name
    protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-)provided by VGNC
    Primary source
    VGNC:VGNC:100044
    Locus tag
    EGK_00710
    See related
    Ensembl:ENSMMUG00000015078
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See POMGNT1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (178192864..178202422)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (45803109..45834184, complement)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene leucine rich repeat containing 41 Neighboring gene RAD54 like Neighboring gene leucine rich adaptor protein 1 Neighboring gene uncharacterized LOC114672613 Neighboring gene tetraspanin 1 Neighboring gene PIK3R3 upstream open reading frame

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in O-glycan processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1
    Names
    protein O-linked mannose beta1,2-N-acetylglucosaminyltransferase
    XP_001106025.1
    XP_014994181.1
    XP_014994196.1
    XP_028690029.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      178192864..178202422
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015138695.2 → XP_014994181.1  protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5QI19, F6WVH8, F7GR52
      Related
      ENSMMUP00000019761.4, ENSMMUT00000021135.4
      Conserved Domains (2) summary
      cd02514
      Location:301 → 628
      GT13_GLCNAC-TI; GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides
      cd13937
      Location:99 → 246
      PANDER_GnT-1_2_like; PANDER-like domain of N-acetylglucosaminyltransferases

    2. XM_001106025.4 → XP_001106025.1  protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1 isoform X3

      See identical proteins and their annotated locations for XP_001106025.1

      UniProtKB/TrEMBL
      G7MGQ7
      Conserved Domains (2) summary
      cd02514
      Location:301 → 623
      GT13_GLCNAC-TI; GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides
      cd13937
      Location:99 → 246
      PANDER_GnT-1_2_like; PANDER-like domain of N-acetylglucosaminyltransferases

    3. XM_028834196.1 → XP_028690029.1  protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1 isoform X2

      UniProtKB/TrEMBL
      A0A1D5QI19, A0A5F8AJ59
      Related
      ENSMMUP00000077884.1, ENSMMUT00000080758.1
      Conserved Domains (2) summary
      cd02514
      Location:241 → 568
      GT13_GLCNAC-TI; GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides
      cl19122
      Location:99 → 186
      PANDER_like; Domains similar to the Pancreatic-derived factor

    4. XM_015138710.2 → XP_014994196.1  protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1 isoform X4

      UniProtKB/TrEMBL
      A0A1D5QI19, A0A1D5QKD7
      Related
      ENSMMUP00000048510.2, ENSMMUT00000075083.2
      Conserved Domains (2) summary
      cd02514
      Location:279 → 606
      GT13_GLCNAC-TI; GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides
      cd13937
      Location:77 → 224
      PANDER_GnT-1_2_like; PANDER-like domain of N-acetylglucosaminyltransferases

    RNA

    1. XR_003722946.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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