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    CG4438 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 34257, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG4438provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0032115
    Locus tag
    Dmel_CG4438
    See related
    AllianceGenome:FB:FBgn0032115
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG4438
    Summary
    Predicted to enable RNA binding activity. Predicted to be active in cytosol. Orthologous to human PDAP1 (PDGFA associated protein 1). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG4438 in Genome Data Viewer
    Location:
    30B1-30B1; 2-35 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (9396999..9397988, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (9396999..9397988, complement)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene antisense RNA:CR43865 Neighboring gene Shaw-like Neighboring gene Aldehyde dehydrogenase Neighboring gene Multicopper oxidase 1 Neighboring gene uncharacterized protein Neighboring gene Fat body protein 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The genetics of egg retention and fertilization success in Drosophila: One step closer to understanding the transition from facultative to obligate viviparity. Horváth B, et al. Evolution, 2018 Feb. PMID 29265369
    2. Proteome-wide dataset supporting the study of ancient metazoan macromolecular complexes. Phanse S, et al. Data Brief, 2016 Mar. PMID 26870755, Free PMC Article
    3. A global in vivo Drosophila RNAi screen identifies NOT3 as a conserved regulator of heart function. Neely GG, et al. Cell, 2010 Apr 2. PMID 20371351, Free PMC Article
    4. A genome-wide Drosophila screen for heat nociception identifies α2δ3 as an evolutionarily conserved pain gene. Neely GG, et al. Cell, 2010 Nov 12. PMID 21074052, Free PMC Article
    5. Systematic genetic analysis of muscle morphogenesis and function in Drosophila. Schnorrer F, et al. Nature, 2010 Mar 11. PMID 20220848

    See all (20) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables RNA binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG4438-PA
    CG4438-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      9396999..9397988 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001201824.2 → NP_001188753.1  uncharacterized protein Dmel_CG4438, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001188753.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VLC4
      Conserved Domains (1) summary
      pfam10252
      Location:101 → 177
      PP28; Casein kinase substrate phosphoprotein PP28

    2. NM_135442.3 → NP_609286.1  uncharacterized protein Dmel_CG4438, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_609286.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VLC4
      Related
      FBpp0079412
      Conserved Domains (1) summary
      pfam10252
      Location:101 → 177
      PP28; Casein kinase substrate phosphoprotein PP28
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VLC4 Q9VLC4

    Gene LinkOut

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