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    CYP79C2 cytochrome p450 79c2 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 842194, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CYP79C2
    Official Full Name
    cytochrome p450 79c2
    Primary source
    TAIR:AT1G58260
    Locus tag
    AT1G58260
    See related
    Araport:AT1G58260
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    CYP79C3P; cytochrome p450 79c2; F19C14.12; F19C14_12
    Summary
    member of CYP79C subfamily of cytochrome p450s. Encodes a putative xylan endohydrolase. similar to some closely linked pseudogenes.
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    Genomic context

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    See CYP79C2 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    3
    Sequence:
    Chromosome: 1; NC_003070.9 (21605752..21607995)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Plant thionin family protein Neighboring gene HYPERSENSITIVE TO PI STARVATION 4 Neighboring gene Cytochrome P450 superfamily protein Neighboring gene TRAF-like family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    cytochrome p450 79c2
    NP_176122.2
    • cytochrome p450 79c2 (CYP79C2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 79, subfamily C, polypeptide 1 (TAIR:AT1G79370.1); Has 29698 Blast hits to 29501 proteins in 1561 species: Archae - 46; Bacteria - 2585; Metazoa - 11224; Fungi - 5851; Plants - 9017; Viruses - 3; Other Eukaryotes - 972 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      21605752..21607995
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_104606.2 → NP_176122.2  cytochrome p450 79c2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_176122.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654EL08, Q9LQB7
      Conserved Domains (1) summary
      cd20658
      Location:72 → 520
      CYP79; cytochrome P450 family 79
    Nucleotide Protein
    Heading Accession and Version

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