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    OLR1 oxidized low density lipoprotein receptor 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 717596, updated on 17-Aug-2024

    Summary

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    Official Symbol
    OLR1provided by VGNC
    Official Full Name
    oxidized low density lipoprotein receptor 1provided by VGNC
    Primary source
    VGNC:VGNC:75583
    Locus tag
    EGK_03358
    See related
    Ensembl:ENSMMUG00000002191
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See OLR1 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 11 NC_041764.1 (9533534..9552047)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 11 NC_027903.1 (10510785..10529682, complement)

    Chromosome 11 - NC_041764.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114670781 Neighboring gene transmembrane protein 52B Neighboring gene uncharacterized LOC107000757 Neighboring gene C-type lectin domain containing 7A Neighboring gene heterogeneous nuclear ribonucleoprotein A/B-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables low-density lipoprotein particle receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell death IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in inflammatory response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in leukocyte cell-cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in lipoprotein metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of receptor complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    oxidized low-density lipoprotein receptor 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001194668.1 → NP_001181597.1  oxidized low-density lipoprotein receptor 1

      See identical proteins and their annotated locations for NP_001181597.1

      Status: PROVISIONAL

      Source sequence(s)
      QNVO02000055
      UniProtKB/TrEMBL
      A0A8J8YGS9, F6WMD2, G7N646
      Related
      ENSMMUP00000002921.2, ENSMMUT00000003094.4
      Conserved Domains (2) summary
      cd03593
      Location:144 → 266
      CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)
      COG1196
      Location:73 → 137
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041764.1 Reference Mmul_10 Primary Assembly

      Range
      9533534..9552047
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015151001.2 → XP_015006487.1  oxidized low-density lipoprotein receptor 1 isoform X1

      UniProtKB/TrEMBL
      A0A8J8YGS9, F6WMD2, G7N646
      Conserved Domains (2) summary
      cd03593
      Location:144 → 266
      CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)
      COG1196
      Location:73 → 137
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    2. XM_015151002.2 → XP_015006488.1  oxidized low-density lipoprotein receptor 1 isoform X2

      Conserved Domains (2) summary
      COG1196
      Location:73 → 137
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      cl02432
      Location:144 → 188
      CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
    Nucleotide Protein
    Heading Accession and Version

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