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    LOC139099884 uncharacterized LOC139099884 [ Chironomus tepperi ]

    Gene ID: 139099884, updated on 1-Jan-2025

    Summary

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    Gene symbol
    LOC139099884
    Gene description
    uncharacterized LOC139099884
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Chironomus tepperi
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Chironomoidea; Chironomidae; Chironominae; Chironomus
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    Genomic context

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    See LOC139099884 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_12 current CSIRO-AGI_Ctep_v1 (GCF_022539635.2) Unplaced Scaffold NW_027226608.1 (1263571..1266636)

    NW_027226608.1Genomic Context describing neighboring genes Neighboring gene neuronal acetylcholine receptor subunit alpha-6-like Neighboring gene apyrase Neighboring gene uncharacterized LOC139099886 Neighboring gene uncharacterized LOC139099883 Neighboring gene uncharacterized LOC139099876 Neighboring gene uncharacterized LOC139099727

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_027226608 Unplaced Scaffold Reference CSIRO-AGI_Ctep_v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of SCF ubiquitin ligase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC139099884

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_022539635.2-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CSIRO-AGI_Ctep_v1 Primary Assembly

    Genomic

    1. NW_027226608.1 Reference CSIRO-AGI_Ctep_v1 Primary Assembly

      Range
      1263571..1266636
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_070652435.1 → XP_070508536.1  uncharacterized protein LOC139099884

    Nucleotide Protein
    Heading Accession and Version