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    Vmn1r196 vomeronasal 1 receptor 196 [ Mus musculus (house mouse) ]

    Gene ID: 100312484, updated on 27-Nov-2024

    Summary

    Official Symbol
    Vmn1r196provided by MGI
    Official Full Name
    vomeronasal 1 receptor 196provided by MGI
    Primary source
    MGI:MGI:4438447
    See related
    Ensembl:ENSMUSG00000069295 AllianceGenome:MGI:4438447
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    V1rh19
    Summary
    Predicted to enable pheromone binding activity and pheromone receptor activity. Predicted to act upstream of or within response to pheromone. Predicted to be located in plasma membrane. [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

    See Vmn1r196 in Genome Data Viewer
    Location:
    13 A3.1; 13 8.47 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (22477363..22478268)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (22293193..22294098)

    Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene vomeronasal 1 receptor 195 Neighboring gene predicted gene 11295 Neighboring gene vomeronasal 1 receptor, pseudogene 100 Neighboring gene STARR-seq mESC enhancer starr_33901 Neighboring gene STARR-seq mESC enhancer starr_33903 Neighboring gene vomeronasal 1 receptor 197

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables pheromone binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    enables pheromone receptor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within response to pheromone ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 

    General protein information

    Preferred Names
    vomeronasal 1 receptor 196
    Names
    vomeronasal 1 receptor Vmn1r196
    vomeronasal 1 receptor, H19
    vomeronasal type 1 receptor H19

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001167541.1NP_001161013.1  vomeronasal 1 receptor 196

      See identical proteins and their annotated locations for NP_001161013.1

      Status: PROVISIONAL

      Source sequence(s)
      AL645546
      Consensus CDS
      CCDS49219.1
      UniProtKB/TrEMBL
      F6MCP7, F6MCQ3, Q5SVD5
      Related
      ENSMUSP00000089329.2, ENSMUST00000091735.2
      Conserved Domains (1) summary
      pfam03402
      Location:39288
      V1R; Vomeronasal organ pheromone receptor family, V1R

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000079.7 Reference GRCm39 C57BL/6J

      Range
      22477363..22478268
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)