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    plekha1b pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1b [ Lepisosteus oculatus (spotted gar) ]

    Gene ID: 102692945, updated on 22-Oct-2024

    Summary

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    Gene symbol
    plekha1b
    Gene description
    pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1b
    See related
    Ensembl:ENSLOCG00000008307
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Lepisosteus oculatus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus
    Also known as
    plekha1
    Orthologs
    human zebrafish all
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    Genomic context

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    See plekha1b in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    RS_2024_09 current fLepOcu1.hap2 (GCF_040954835.1) 4 NC_090699.1 (27784854..27825949, complement)
    101 previous assembly LepOcu1 (GCF_000242695.1) Linkage Group LG5 NC_023183.1 (14913501..14954705, complement)

    Chromosome 4 - NC_090699.1Genomic Context describing neighboring genes Neighboring gene CUB and zona pellucida-like domain-containing protein 1 Neighboring gene HtrA serine peptidase 1b Neighboring gene BTB (POZ) domain containing 16 Neighboring gene WAPL cohesin release factor b

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    pleckstrin homology domain-containing family A member 1
    Names
    pleckstrin homology domain containing A1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_040954835.1-RS_2024_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fLepOcu1.hap2

    Genomic

    1. NC_090699.1 Reference fLepOcu1.hap2

      Range
      27784854..27825949 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015346649.2 → XP_015202135.1  pleckstrin homology domain-containing family A member 1 isoform X1

      UniProtKB/TrEMBL
      W5MNZ8
      Conserved Domains (3) summary
      cd13270
      Location:1 → 118
      PH1_TAPP1_2; Tandem PH-domain-containing proteins 1 and 2 Pleckstrin homology (PH) domain, N-terminal repeat
      cd13271
      Location:186 → 299
      PH2_TAPP1_2; Tandem PH-domain-containing proteins 1 and 2 Pleckstrin homology (PH) domain, C-terminal repeat
      pfam00169
      Location:193 → 289
      PH; PH domain

    2. XM_015346650.2 → XP_015202136.1  pleckstrin homology domain-containing family A member 1 isoform X1

      UniProtKB/TrEMBL
      W5MNZ8
      Conserved Domains (3) summary
      cd13270
      Location:1 → 118
      PH1_TAPP1_2; Tandem PH-domain-containing proteins 1 and 2 Pleckstrin homology (PH) domain, N-terminal repeat
      cd13271
      Location:186 → 299
      PH2_TAPP1_2; Tandem PH-domain-containing proteins 1 and 2 Pleckstrin homology (PH) domain, C-terminal repeat
      pfam00169
      Location:193 → 289
      PH; PH domain

    3. XM_015346651.2 → XP_015202137.1  pleckstrin homology domain-containing family A member 1 isoform X1

      UniProtKB/TrEMBL
      W5MNZ8
      Conserved Domains (3) summary
      cd13270
      Location:1 → 118
      PH1_TAPP1_2; Tandem PH-domain-containing proteins 1 and 2 Pleckstrin homology (PH) domain, N-terminal repeat
      cd13271
      Location:186 → 299
      PH2_TAPP1_2; Tandem PH-domain-containing proteins 1 and 2 Pleckstrin homology (PH) domain, C-terminal repeat
      pfam00169
      Location:193 → 289
      PH; PH domain

    4. XM_015346653.2 → XP_015202139.1  pleckstrin homology domain-containing family A member 1 isoform X3

      UniProtKB/TrEMBL
      W5MNZ8
      Related
      ENSLOCP00000010107.1
      Conserved Domains (4) summary
      cd13270
      Location:1 → 118
      PH1_TAPP1_2; Tandem PH-domain-containing proteins 1 and 2 Pleckstrin homology (PH) domain, N-terminal repeat
      cd13271
      Location:186 → 299
      PH2_TAPP1_2; Tandem PH-domain-containing proteins 1 and 2 Pleckstrin homology (PH) domain, C-terminal repeat
      pfam00169
      Location:193 → 289
      PH; PH domain
      pfam13908
      Location:295 → 360
      Shisa; Wnt and FGF inhibitory regulator

    5. XM_006630421.3 → XP_006630484.1  pleckstrin homology domain-containing family A member 1 isoform X2

      UniProtKB/TrEMBL
      W5MNY5, W5MNZ8
      Related
      ENSLOCP00000010094.1
      Conserved Domains (3) summary
      cd13270
      Location:1 → 118
      PH1_TAPP1_2; Tandem PH-domain-containing proteins 1 and 2 Pleckstrin homology (PH) domain, N-terminal repeat
      cd13271
      Location:186 → 299
      PH2_TAPP1_2; Tandem PH-domain-containing proteins 1 and 2 Pleckstrin homology (PH) domain, C-terminal repeat
      pfam00169
      Location:193 → 289
      PH; PH domain

    6. XM_015346656.2 → XP_015202142.1  pleckstrin homology domain-containing family A member 1 isoform X5

      UniProtKB/TrEMBL
      W5MNZ8
      Conserved Domains (3) summary
      cd13270
      Location:1 → 118
      PH1_TAPP1_2; Tandem PH-domain-containing proteins 1 and 2 Pleckstrin homology (PH) domain, N-terminal repeat
      cd13271
      Location:186 → 299
      PH2_TAPP1_2; Tandem PH-domain-containing proteins 1 and 2 Pleckstrin homology (PH) domain, C-terminal repeat
      pfam00169
      Location:193 → 289
      PH; PH domain

    7. XM_015346657.2 → XP_015202143.1  pleckstrin homology domain-containing family A member 1 isoform X7

      Conserved Domains (3) summary
      cd13270
      Location:1 → 118
      PH1_TAPP1_2; Tandem PH-domain-containing proteins 1 and 2 Pleckstrin homology (PH) domain, N-terminal repeat
      cd13271
      Location:186 → 299
      PH2_TAPP1_2; Tandem PH-domain-containing proteins 1 and 2 Pleckstrin homology (PH) domain, C-terminal repeat
      pfam00169
      Location:193 → 289
      PH; PH domain

    8. XM_069189013.1 → XP_069045114.1  pleckstrin homology domain-containing family A member 1 isoform X6

    9. XM_015346654.2 → XP_015202140.1  pleckstrin homology domain-containing family A member 1 isoform X4

      UniProtKB/TrEMBL
      W5MNZ8
      Conserved Domains (3) summary
      cd13270
      Location:1 → 118
      PH1_TAPP1_2; Tandem PH-domain-containing proteins 1 and 2 Pleckstrin homology (PH) domain, N-terminal repeat
      cd13271
      Location:186 → 299
      PH2_TAPP1_2; Tandem PH-domain-containing proteins 1 and 2 Pleckstrin homology (PH) domain, C-terminal repeat
      pfam00169
      Location:193 → 289
      PH; PH domain
    Nucleotide Protein
    Heading Accession and Version

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