prelid3b PRELI domain containing 3 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: prelid3bprovided by ZNC
Official Full Name: PRELI domain containing 3provided by ZNC
Primary source: ZFIN:ZDB-GENE-031002-13
See related: Ensembl:ENSDARG00000009505 AllianceGenome:ZFIN:ZDB-GENE-031002-13
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: slmo2; c20orf45; sb:cb835; zgc:56029; wu:fd54c05
Summary: Predicted to enable phosphatidic acid transfer activity. Predicted to be involved in phospholipid transport. Predicted to be active in mitochondrial intermembrane space. Is expressed in several structures, including alar plate midbrain region; intermediate cell mass of mesoderm; musculature system; optic vesicle; and ventral mesoderm. Orthologous to human PRELID3B (PRELI domain containing 3B). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 6

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	6	NC_007117.7 (60112200..60122081)
105	previous assembly	GRCz10 (GCF_000002035.5)	6	NC_007117.6 (60117277..60127158)

Chromosome 6 - NC_007117.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

z99210 (e-PCR), detects polymorphism
- UniSTS:238864

fd54c05.x1 (e-PCR)
- UniSTS:195634

Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables phosphatidic acid transfer activity	IBA Inferred from Biological aspect of Ancestor more info

Process	Evidence Code	Pubs
involved_in phospholipid transport	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
is_active_in mitochondrial intermembrane space	IBA Inferred from Biological aspect of Ancestor more info
located_in mitochondrial intermembrane space	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: PRELI domain containing protein 3B

Names: slowmo homolog 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.