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    ube2g1a ubiquitin-conjugating enzyme E2G 1a (UBC7 homolog, yeast) [ Danio rerio (zebrafish) ]

    Gene ID: 334133, updated on 9-Dec-2024

    Summary

    Official Symbol
    ube2g1aprovided by ZNC
    Official Full Name
    ubiquitin-conjugating enzyme E2G 1a (UBC7 homolog, yeast)provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-6065
    See related
    Ensembl:ENSDARG00000015292 AllianceGenome:ZFIN:ZDB-GENE-030131-6065
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    ube2g1; ube2g2; zgc:55974; wu:fi33c04
    Summary
    Predicted to enable ubiquitin conjugating enzyme activity. Predicted to be involved in proteasome-mediated ubiquitin-dependent protein catabolic process and protein polyubiquitination. Orthologous to human UBE2G1 (ubiquitin conjugating enzyme E2 G1). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See ube2g1a in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 5 NC_007116.7 (30986512..30995108)
    105 previous assembly GRCz10 (GCF_000002035.5) 5 NC_007116.6 (30386359..30394955)

    Chromosome 5 - NC_007116.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC137495599 Neighboring gene SPNS lysolipid transporter 2, sphingosine-1-phosphate Neighboring gene SPNS lysolipid transporter 3, sphingosine-1-phosphate (putative) Neighboring gene ankyrin repeat and FYVE domain containing 1 Neighboring gene cytochrome b5 domain containing 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Markers

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables nucleotide binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables transferase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables ubiquitin conjugating enzyme activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in protein polyubiquitination IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    ubiquitin-conjugating enzyme E2 G1a
    Names
    ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, C. elegans)
    ubiquitin-conjugating enzyme E2G 2
    NP_956157.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_199863.1NP_956157.1  ubiquitin-conjugating enzyme E2 G1a

      See identical proteins and their annotated locations for NP_956157.1

      Status: PROVISIONAL

      Source sequence(s)
      BC045512
      UniProtKB/TrEMBL
      A0A8M1PEP1, Q7ZVK2
      Related
      ENSDARP00000016596.5, ENSDART00000005893.7
      Conserved Domains (1) summary
      pfam00179
      Location:10161
      UQ_con; Ubiquitin-conjugating enzyme

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007116.7 Reference GRCz11 Primary Assembly

      Range
      30986512..30995108
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018394583.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      267981..276577
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)