castor2 cytosolic arginine sensor for mTORC1 subunit 2 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: castor2provided by ZNC
Official Full Name: cytosolic arginine sensor for mTORC1 subunit 2provided by ZNC
Primary source: ZFIN:ZDB-GENE-030131-5505
See related: Ensembl:ENSDARG00000018985 AllianceGenome:ZFIN:ZDB-GENE-030131-5505
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: gats; gatsl2; sb:cb509; zgc:55700; zgc:66173; wu:fc27d10; wu:fd20f09; wu:fe01c02
Summary: Predicted to be involved in cellular response to L-arginine and negative regulation of TORC1 signaling. Predicted to be located in cytoplasm. Predicted to be active in cytosol. Is expressed in artery; blood; notochord; and yolk syncytial layer. Orthologous to several human genes including CASTOR2 (cytosolic arginine sensor for mTORC1 subunit 2). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 5

Exon count:: 9

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	5	NC_007116.7 (61361815..61403813)
105	previous assembly	GRCz10 (GCF_000002035.5)	5	NC_007116.6 (60677094..60719092)

Chromosome 5 - NC_007116.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Markers

fe50a08.y1 (e-PCR)
- UniSTS:196568

fc27d10.x1 (e-PCR)
- UniSTS:187881

fd20f09.x1 (e-PCR)
- UniSTS:204281

Gene Ontology Provided by ZFIN

Process	Evidence Code	Pubs
involved_in cellular response to L-arginine	IBA Inferred from Biological aspect of Ancestor more info
involved_in negative regulation of TORC1 signaling	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info
is_active_in cytosol	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: cytosolic arginine sensor for mTORC1 subunit 2

Names: GATS protein-like 2; opposite strand transcription unit to Stag3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.