U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Nucleotide

    • Showing Current items.

    cmip c-Maf inducing protein [ Danio rerio (zebrafish) ]

    Gene ID: 561893, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    cmipprovided by ZNC
    Official Full Name
    c-Maf inducing proteinprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-050419-50
    See related
    Ensembl:ENSDARG00000062933 AllianceGenome:ZFIN:ZDB-GENE-050419-50
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    si:ch211-260p9.1
    Summary
    Predicted to be active in cytosol and nucleoplasm. Orthologous to human CMIP (c-Maf inducing protein). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See cmip in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 18 NC_007129.7 (13324137..13360128, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 18 NC_007129.6 (13355628..13391619, complement)

    Chromosome 18 - NC_007129.7Genomic Context describing neighboring genes Neighboring gene si:ch211-260p9.3 Neighboring gene phospholipase C, gamma 2 Neighboring gene uncharacterized LOC137488219 Neighboring gene cadherin 13, H-cadherin (heart)

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Expression

    Go to the top of the page Help
    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Candidate risk genes for bipolar disorder are highly conserved during evolution and highly interconnected. Franklin C, et al. Bipolar Disord, 2021 Jun. PMID 32959503
    2. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article
    3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    General protein information

    Go to the top of the page Help
    Preferred Names
    C-Maf-inducing protein

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007129.7 Reference GRCz11 Primary Assembly

      Range
      13324137..13360128 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_685295.10 → XP_690387.5  C-Maf-inducing protein isoform X1

      UniProtKB/TrEMBL
      A0A8N7TD80
      Related
      ENSDARP00000085945.5, ENSDART00000091512.6
      Conserved Domains (2) summary
      cd00116
      Location:524 → 673
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      sd00034
      Location:566 → 589
      LRR_AMN1; leucine-rich repeat [structural motif]

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018395012.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      2561..6968 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021473247.2 → XP_021328922.1  C-Maf-inducing protein isoform X2

      UniProtKB/TrEMBL
      A0A8M9PCZ5
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools