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    MONOS_9511 U4/U6 small nuclear ribonucleoprotein PRP4 [ Monocercomonoides exilis ]

    Gene ID: 94215592, updated on 11-Sep-2024

    Summary

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    Gene symbol
    MONOS_9511
    Gene description
    U4/U6 small nuclear ribonucleoprotein PRP4
    Locus tag
    MONOS_9511
    See related
    GiardiaDB:MONOS_9511; VEuPathDB:MONOS_9511
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Monocercomonoides exilis (strain: PA203, nat-host: Chinchilla lanigera)
    Lineage
    Eukaryota; Metamonada; Preaxostyla; Oxymonadida; Polymastigidae; Monocercomonoides
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    Genomic context

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    See MONOS_9511 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    9

    NW_027150560.1Genomic Context describing neighboring genes Neighboring gene putative Grp94 Neighboring gene putative ankyrin repeat-rich membrane spanning protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_027150560.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A Eukaryote without a Mitochondrial Organelle. Karnkowska A, et al. Curr Biol, 2016 May 23. PMID 27185558
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables U4 snRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables U6 snRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mRNA splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of U4/U6 x U5 tri-snRNP complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    U4/U6 small nuclear ribonucleoprotein PRP4

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_027150560.1 Reference assembly

      Range
      601145..604567
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_067880019.1 → XP_067729924.1  U4/U6 small nuclear ribonucleoprotein PRP4 [Monocercomonoides exilis]

      Status: PROVISIONAL

    Nucleotide Protein
    Heading Accession and Version