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    UBE2R2-AS1 UBE2R2 antisense RNA 1 [ Homo sapiens (human) ]

    Gene ID: 101929688, updated on 10-Dec-2024

    Summary

    Official Symbol
    UBE2R2-AS1provided by HGNC
    Official Full Name
    UBE2R2 antisense RNA 1provided by HGNC
    Primary source
    HGNC:HGNC:49911
    See related
    Ensembl:ENSG00000235481 AllianceGenome:HGNC:49911
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    LINC01251
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    Genomic context

    See UBE2R2-AS1 in Genome Data Viewer
    Location:
    9p13.3
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (33724085..33818868, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (33742642..33837455, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (33724083..33818866, complement)

    Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene T cell receptor beta variable 26/OR9-2 (pseudogene) Neighboring gene uncharacterized LOC124902143 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28300 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:33721507-33722008 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:33722009-33722508 Neighboring gene MPRA-validated peak7221 silencer Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28301 Neighboring gene serine protease 3 Neighboring gene T cell receptor beta variable 29/OR9-2 (non-functional) Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:33796108-33796608 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28302 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19835 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19836 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19837 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19838 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19839 Neighboring gene ubiquitin conjugating enzyme E2 R2 Neighboring gene RNA, U4atac small nuclear 11, pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28303 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:33927431-33928421 Neighboring gene small nucleolar RNA, C/D box 121B Neighboring gene ubiquitin associated protein 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_001337.2 

      Range
      126515..131956 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. NR_170201.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL139113, AL356489
    2. NR_170202.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL139113, AL356489, AL358573
    3. NR_170203.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL139113, AL356489, AL358573
    4. NR_170204.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL139113, AL356489, AL358573
    5. NR_170205.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL139113, AL356489, AL358573
    6. NR_170206.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL139113, AL356489, AL358573
    7. NR_170207.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL139113, AL356489, AL358573
      Related
      ENST00000705030.1
    8. NR_170208.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL139113, AL356489, AL358573
    9. NR_170209.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL139113, AL356489, AL358573
    10. NR_170210.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL139113, AL356489, AL358573
    11. NR_170211.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL139113, AL356489, AL358573
    12. NR_170212.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL139113, AL356489
    13. NR_170213.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL139113, AL356489, AL358573
    14. NR_170215.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL139113, AL356489, AL358573
    15. NR_170216.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL139113, AL356489, AL358573

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

      Range
      33724085..33818868 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060933.1 Alternate T2T-CHM13v2.0

      Range
      33742642..33837455 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)