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    Psf2 DNA replication complex GINS protein PSF2-like protein [ Halyomorpha halys (brown marmorated stink bug) ]

    Gene ID: 106681136, updated on 2-Aug-2024

    Summary

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    Gene symbol
    Psf2
    Gene description
    DNA replication complex GINS protein PSF2-like protein
    See related
    EnsemblRapid:LOC106681136
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Halyomorpha halys
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Heteroptera; Panheteroptera; Pentatomomorpha; Pentatomoidea; Pentatomidae; Pentatominae; Halyomorpha
    Orthologs
    fruit fly all
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    Genomic context

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    See Psf2 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_07 current Hhal_1.1 (GCF_000696795.3) Unplaced Scaffold NW_027105402.1 (514238..552673, complement)
    100 previous assembly Hhal_1.0 (GCF_000696795.1) Unplaced Scaffold NW_014466728.1 (538044..552778, complement)

    NW_027105402.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106681140 Neighboring gene uncharacterized LOC106681139 Neighboring gene TNF receptor associated factor 4 Neighboring gene GTP-binding protein 1 Neighboring gene protein YIPF3-like Neighboring gene Mahogunin ring finger 1 Neighboring gene mediator complex subunit 9

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Rapid transcriptome sequencing of an invasive pest, the brown marmorated stink bug Halyomorpha halys. Ioannidis P, et al. BMC Genomics, 2014 Aug 29. PMID 25168586, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in DNA replication IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in double-strand break repair via break-induced replication IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of GINS complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    probable DNA replication complex GINS protein PSF2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000696795.3-RS_2024_07

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Hhal_1.1 Primary Assembly

    Genomic

    1. NW_027105402.1 Reference Hhal_1.1 Primary Assembly

      Range
      514238..552673 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_067050976.1 → XP_066907077.1  probable DNA replication complex GINS protein PSF2

    2. XM_014421307.3 → XP_014276793.1  probable DNA replication complex GINS protein PSF2

      Related
      XP_014276793.1
      Conserved Domains (1) summary
      cd11712
      Location:56 → 166
      GINS_A_psf2; Alpha-helical domain of GINS complex protein Psf2 (partner of Sld5 2)

    3. XM_067050969.1 → XP_066907070.1  probable DNA replication complex GINS protein PSF2

    4. XM_014421308.3 → XP_014276794.1  probable DNA replication complex GINS protein PSF2

      Related
      XP_014276794.1
      Conserved Domains (1) summary
      cd11712
      Location:56 → 166
      GINS_A_psf2; Alpha-helical domain of GINS complex protein Psf2 (partner of Sld5 2)

    5. XM_014421309.3 → XP_014276795.1  probable DNA replication complex GINS protein PSF2

      Related
      XP_014276795.1
      Conserved Domains (1) summary
      cd11712
      Location:56 → 166
      GINS_A_psf2; Alpha-helical domain of GINS complex protein Psf2 (partner of Sld5 2)
    Nucleotide Protein
    Heading Accession and Version

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