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    LOC112017094 COP9 signalosome complex subunit 3-like [ Quercus suber ]

    Gene ID: 112017094, updated on 3-Jul-2024

    Summary

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    Gene symbol
    LOC112017094
    Gene description
    COP9 signalosome complex subunit 3-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Quercus suber
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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    Genomic context

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    See LOC112017094 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    RS_2024_06 current Cork oak 2.0 (GCF_002906115.3) Unplaced Scaffold NW_027071808.1 (310645..324804, complement)
    100 previous assembly CorkOak1.0 (GCF_002906115.1) Unplaced Scaffold NW_019807655.1 (141697..144599, complement)

    NW_027071808.1Genomic Context describing neighboring genes Neighboring gene extra-large guanine nucleotide-binding protein 3 Neighboring gene COP9 signalosome complex subunit 3-like Neighboring gene uncharacterized LOC112017081 Neighboring gene uncharacterized LOC136066244

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of COP9 signalosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    COP9 signalosome complex subunit 3-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002906115.3-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Cork oak 2.0

    Genomic

    1. NW_027071808.1 Reference Cork oak 2.0

      Range
      310645..324804 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_065770249.1 → XP_065626321.1  COP9 signalosome complex subunit 3-like isoform X1

    2. XM_065770250.1 → XP_065626322.1  COP9 signalosome complex subunit 3-like isoform X1

    3. XM_065770247.1 → XP_065626319.1  COP9 signalosome complex subunit 3-like isoform X1

    4. XM_065770248.1 → XP_065626320.1  COP9 signalosome complex subunit 3-like isoform X1

    5. XM_065770241.1 → XP_065626313.1  COP9 signalosome complex subunit 3-like isoform X1

    6. XM_065770245.1 → XP_065626317.1  COP9 signalosome complex subunit 3-like isoform X1

    7. XM_065770242.1 → XP_065626314.1  COP9 signalosome complex subunit 3-like isoform X1

    8. XM_065770240.1 → XP_065626312.1  COP9 signalosome complex subunit 3-like isoform X1

    9. XM_065770244.1 → XP_065626316.1  COP9 signalosome complex subunit 3-like isoform X1

    10. XM_065770239.1 → XP_065626311.1  COP9 signalosome complex subunit 3-like isoform X1

    11. XM_065770255.1 → XP_065626327.1  COP9 signalosome complex subunit 3-like isoform X4

    12. XM_065770256.1 → XP_065626328.1  COP9 signalosome complex subunit 3-like isoform X5

    13. XM_065770236.1 → XP_065626308.1  COP9 signalosome complex subunit 3-like isoform X1

    14. XM_065770237.1 → XP_065626309.1  COP9 signalosome complex subunit 3-like isoform X1

    15. XM_065770246.1 → XP_065626318.1  COP9 signalosome complex subunit 3-like isoform X1

    16. XM_065770238.1 → XP_065626310.1  COP9 signalosome complex subunit 3-like isoform X1

    17. XM_065770260.1 → XP_065626332.1  COP9 signalosome complex subunit 3-like isoform X6

    18. XM_065770258.1 → XP_065626330.1  COP9 signalosome complex subunit 3-like isoform X5

    19. XM_065770253.1 → XP_065626325.1  COP9 signalosome complex subunit 3-like isoform X3

    20. XM_065770259.1 → XP_065626331.1  COP9 signalosome complex subunit 3-like isoform X6

    21. XM_065770257.1 → XP_065626329.1  COP9 signalosome complex subunit 3-like isoform X5

    22. XM_065770252.1 → XP_065626324.1  COP9 signalosome complex subunit 3-like isoform X3

    23. XM_065770251.1 → XP_065626323.1  COP9 signalosome complex subunit 3-like isoform X2

    RNA

    1. XR_010627706.1 RNA Sequence

    2. XR_010627707.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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