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    ATXN2L ataxin 2 like [ Macaca fascicularis (crab-eating macaque) ]

    Gene ID: 102117238, updated on 3-Dec-2024

    Summary

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    Gene symbol
    ATXN2L
    Gene description
    ataxin 2 like
    See related
    Ensembl:ENSMFAG00000030590
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca fascicularis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See ATXN2L in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    25
    Annotation release Status Assembly Chr Location
    RS_2024_05 current T2T-MFA8v1.0 (GCF_037993035.1) 20 NC_088394.1 (27637180..27651932, complement)
    102 previous assembly MFA1912RKSv2 (GCF_012559485.2) 20 NC_052274.1 (26856548..26871619, complement)

    Chromosome 20 - NC_088394.1Genomic Context describing neighboring genes Neighboring gene SH2B adaptor protein 1 Neighboring gene Tu translation elongation factor, mitochondrial Neighboring gene uncharacterized LOC101926300 Neighboring gene uncharacterized LOC135968878 Neighboring gene small nucleolar RNA U13

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in stress granule assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasmic stress granule IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ataxin-2-like protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_037993035.1-RS_2024_05

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference T2T-MFA8v1.0

    Genomic

    1. NC_088394.1 Reference T2T-MFA8v1.0

      Range
      27637180..27651932 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_045382844.2 → XP_045238779.1  ataxin-2-like protein isoform X20

      UniProtKB/TrEMBL
      A0A2K5UUU0

    2. XM_005591563.4 → XP_005591620.1  ataxin-2-like protein isoform X14

      See identical proteins and their annotated locations for XP_005591620.1

      UniProtKB/TrEMBL
      A0A2K5UUU0
      Conserved Domains (4) summary
      COG5180
      Location:211 → 746
      PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
      pfam03153
      Location:759 → 943
      TFIIA; Transcription factor IIA, alpha/beta subunit
      pfam06741
      Location:266 → 328
      LsmAD; LsmAD domain
      pfam14438
      Location:124 → 193
      SM-ATX; Ataxin 2 SM domain

    3. XM_005591562.4 → XP_005591619.1  ataxin-2-like protein isoform X13

      See identical proteins and their annotated locations for XP_005591619.1

      UniProtKB/TrEMBL
      A0A2K5UV24
      Conserved Domains (2) summary
      pfam06741
      Location:266 → 328
      LsmAD; LsmAD domain
      pfam14438
      Location:124 → 193
      SM-ATX; Ataxin 2 SM domain

    4. XM_065537385.1 → XP_065393457.1  ataxin-2-like protein isoform X17

      UniProtKB/TrEMBL
      A0A2K5UUU0

    5. XM_065537387.1 → XP_065393459.1  ataxin-2-like protein isoform X17

      UniProtKB/TrEMBL
      A0A2K5UUU0

    6. XM_065537386.1 → XP_065393458.1  ataxin-2-like protein isoform X17

      UniProtKB/TrEMBL
      A0A2K5UUU0

    7. XM_065537384.1 → XP_065393456.1  ataxin-2-like protein isoform X4

      UniProtKB/TrEMBL
      A0A2K5UUU0

    8. XM_065537382.1 → XP_065393454.1  ataxin-2-like protein isoform X4

      UniProtKB/TrEMBL
      A0A2K5UUU0

    9. XM_065537383.1 → XP_065393455.1  ataxin-2-like protein isoform X4

      UniProtKB/TrEMBL
      A0A2K5UUU0

    10. XM_005591559.4 → XP_005591616.1  ataxin-2-like protein isoform X9

      See identical proteins and their annotated locations for XP_005591616.1

      UniProtKB/TrEMBL
      A0A2K5UUU0
      Conserved Domains (4) summary
      COG5180
      Location:211 → 746
      PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
      pfam03153
      Location:759 → 943
      TFIIA; Transcription factor IIA, alpha/beta subunit
      pfam06741
      Location:266 → 328
      LsmAD; LsmAD domain
      pfam14438
      Location:124 → 193
      SM-ATX; Ataxin 2 SM domain

    11. XM_005591558.4 → XP_005591615.1  ataxin-2-like protein isoform X8

      See identical proteins and their annotated locations for XP_005591615.1

      UniProtKB/TrEMBL
      A0A2K5UV24
      Conserved Domains (2) summary
      pfam06741
      Location:266 → 328
      LsmAD; LsmAD domain
      pfam14438
      Location:124 → 193
      SM-ATX; Ataxin 2 SM domain

    12. XM_065537379.1 → XP_065393451.1  ataxin-2-like protein isoform X2

      UniProtKB/TrEMBL
      A0A2K5UUU0

    13. XM_065537377.1 → XP_065393449.1  ataxin-2-like protein isoform X2

      UniProtKB/TrEMBL
      A0A2K5UUU0

    14. XM_065537378.1 → XP_065393450.1  ataxin-2-like protein isoform X2

      UniProtKB/TrEMBL
      A0A2K5UUU0

    15. XM_015442531.3 → XP_015298017.1  ataxin-2-like protein isoform X12

      UniProtKB/TrEMBL
      A0A2K5UUU0
      Conserved Domains (4) summary
      pfam06741
      Location:266 → 328
      LsmAD; LsmAD domain
      pfam14438
      Location:125 → 198
      SM-ATX; Ataxin 2 SM domain
      cl25764
      Location:760 → 999
      PAT1; Topoisomerase II-associated protein PAT1
      cl26464
      Location:338 → 950
      Atrophin-1; Atrophin-1 family

    16. XM_015442530.3 → XP_015298016.1  ataxin-2-like protein isoform X11

      UniProtKB/TrEMBL
      A0A2K5UV24
      Conserved Domains (4) summary
      COG5180
      Location:211 → 752
      PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
      pfam03153
      Location:765 → 949
      TFIIA; Transcription factor IIA, alpha/beta subunit
      pfam06741
      Location:266 → 328
      LsmAD; LsmAD domain
      pfam14438
      Location:124 → 193
      SM-ATX; Ataxin 2 SM domain

    17. XM_015442534.3 → XP_015298020.1  ataxin-2-like protein isoform X15

      UniProtKB/TrEMBL
      A0A2K5UUU0
      Conserved Domains (4) summary
      COG5180
      Location:211 → 752
      PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
      pfam09770
      Location:798 → 1039
      PAT1; Topoisomerase II-associated protein PAT1
      pfam06741
      Location:266 → 334
      LsmAD; LsmAD domain
      pfam14438
      Location:122 → 198
      SM-ATX; Ataxin 2 SM domain

    18. XM_065537380.1 → XP_065393452.1  ataxin-2-like protein isoform X3

      UniProtKB/TrEMBL
      A0A2K5UUU0

    19. XM_065537381.1 → XP_065393453.1  ataxin-2-like protein isoform X3

      UniProtKB/TrEMBL
      A0A2K5UUU0

    20. XM_015442524.3 → XP_015298010.1  ataxin-2-like protein isoform X7

      UniProtKB/TrEMBL
      A0A2K5UUU0
      Conserved Domains (4) summary
      pfam06741
      Location:266 → 328
      LsmAD; LsmAD domain
      pfam14438
      Location:125 → 198
      SM-ATX; Ataxin 2 SM domain
      cl25764
      Location:760 → 999
      PAT1; Topoisomerase II-associated protein PAT1
      cl26464
      Location:338 → 950
      Atrophin-1; Atrophin-1 family

    21. XM_015442523.3 → XP_015298009.1  ataxin-2-like protein isoform X6

      UniProtKB/TrEMBL
      A0A2K5UV24
      Conserved Domains (3) summary
      COG5180
      Location:211 → 752
      PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
      pfam06741
      Location:266 → 328
      LsmAD; LsmAD domain
      pfam14438
      Location:124 → 193
      SM-ATX; Ataxin 2 SM domain

    22. XM_015442516.3 → XP_015298002.1  ataxin-2-like protein isoform X1

      UniProtKB/TrEMBL
      A0A2K5UUU0
      Conserved Domains (4) summary
      COG5180
      Location:211 → 752
      PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
      PRK10263
      Location:669 → 949
      PRK10263; DNA translocase FtsK; Provisional
      pfam06741
      Location:266 → 328
      LsmAD; LsmAD domain
      pfam14438
      Location:125 → 198
      SM-ATX; Ataxin 2 SM domain

    23. XM_015442535.3 → XP_015298021.1  ataxin-2-like protein isoform X15

      UniProtKB/TrEMBL
      A0A2K5UUU0
      Conserved Domains (4) summary
      COG5180
      Location:211 → 752
      PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
      pfam09770
      Location:798 → 1039
      PAT1; Topoisomerase II-associated protein PAT1
      pfam06741
      Location:266 → 334
      LsmAD; LsmAD domain
      pfam14438
      Location:122 → 198
      SM-ATX; Ataxin 2 SM domain

    24. XM_015442528.3 → XP_015298014.1  ataxin-2-like protein isoform X10

      UniProtKB/TrEMBL
      A0A2K5UUU0
      Conserved Domains (4) summary
      PHA03247
      Location:676 → 1059
      PHA03247; large tegument protein UL36; Provisional
      COG5180
      Location:211 → 752
      PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
      pfam06741
      Location:266 → 328
      LsmAD; LsmAD domain
      pfam14438
      Location:125 → 198
      SM-ATX; Ataxin 2 SM domain

    25. XM_015442518.3 → XP_015298004.1  ataxin-2-like protein isoform X1

      UniProtKB/TrEMBL
      A0A2K5UUU0
      Conserved Domains (4) summary
      COG5180
      Location:211 → 752
      PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
      PRK10263
      Location:669 → 949
      PRK10263; DNA translocase FtsK; Provisional
      pfam06741
      Location:266 → 328
      LsmAD; LsmAD domain
      pfam14438
      Location:125 → 198
      SM-ATX; Ataxin 2 SM domain

    26. XM_015442533.3 → XP_015298019.1  ataxin-2-like protein isoform X15

      UniProtKB/TrEMBL
      A0A2K5UUU0
      Conserved Domains (4) summary
      COG5180
      Location:211 → 752
      PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
      pfam09770
      Location:798 → 1039
      PAT1; Topoisomerase II-associated protein PAT1
      pfam06741
      Location:266 → 334
      LsmAD; LsmAD domain
      pfam14438
      Location:122 → 198
      SM-ATX; Ataxin 2 SM domain

    27. XM_015442527.3 → XP_015298013.1  ataxin-2-like protein isoform X10

      UniProtKB/TrEMBL
      A0A2K5UUU0
      Conserved Domains (4) summary
      PHA03247
      Location:676 → 1059
      PHA03247; large tegument protein UL36; Provisional
      COG5180
      Location:211 → 752
      PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
      pfam06741
      Location:266 → 328
      LsmAD; LsmAD domain
      pfam14438
      Location:125 → 198
      SM-ATX; Ataxin 2 SM domain

    28. XM_045382831.2 → XP_045238766.1  ataxin-2-like protein isoform X10

      UniProtKB/TrEMBL
      A0A2K5UUU0
      Conserved Domains (4) summary
      PHA03247
      Location:676 → 1059
      PHA03247; large tegument protein UL36; Provisional
      COG5180
      Location:211 → 752
      PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
      pfam06741
      Location:266 → 328
      LsmAD; LsmAD domain
      pfam14438
      Location:125 → 198
      SM-ATX; Ataxin 2 SM domain

    29. XM_015442517.3 → XP_015298003.1  ataxin-2-like protein isoform X1

      UniProtKB/TrEMBL
      A0A2K5UUU0
      Related
      ENSMFAP00000016185.1
      Conserved Domains (4) summary
      COG5180
      Location:211 → 752
      PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
      PRK10263
      Location:669 → 949
      PRK10263; DNA translocase FtsK; Provisional
      pfam06741
      Location:266 → 328
      LsmAD; LsmAD domain
      pfam14438
      Location:125 → 198
      SM-ATX; Ataxin 2 SM domain

    30. XM_015442526.3 → XP_015298012.1  ataxin-2-like protein isoform X10

      UniProtKB/TrEMBL
      A0A2K5UUU0
      Conserved Domains (4) summary
      PHA03247
      Location:676 → 1059
      PHA03247; large tegument protein UL36; Provisional
      COG5180
      Location:211 → 752
      PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
      pfam06741
      Location:266 → 328
      LsmAD; LsmAD domain
      pfam14438
      Location:125 → 198
      SM-ATX; Ataxin 2 SM domain

    31. XM_015442537.3 → XP_015298023.1  ataxin-2-like protein isoform X16

      UniProtKB/TrEMBL
      G7Q0U2
      Conserved Domains (4) summary
      COG5180
      Location:150 → 691
      PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
      pfam09770
      Location:737 → 975
      PAT1; Topoisomerase II-associated protein PAT1
      pfam06741
      Location:205 → 273
      LsmAD; LsmAD domain
      pfam14438
      Location:61 → 137
      SM-ATX; Ataxin 2 SM domain

    32. XM_045382842.2 → XP_045238777.1  ataxin-2-like protein isoform X18

      UniProtKB/TrEMBL
      G7Q0U2

    33. XM_045382843.2 → XP_045238778.1  ataxin-2-like protein isoform X19

      UniProtKB/TrEMBL
      A0A2K5UUU0

    34. XM_015442522.3 → XP_015298008.1  ataxin-2-like protein isoform X5

      UniProtKB/TrEMBL
      A0A2K5UUU0
      Related
      ENSMFAP00000015900.1
      Conserved Domains (4) summary
      pfam06741
      Location:266 → 328
      LsmAD; LsmAD domain
      pfam14438
      Location:125 → 198
      SM-ATX; Ataxin 2 SM domain
      cl25764
      Location:871 → 1038
      PAT1; Topoisomerase II-associated protein PAT1
      cl26464
      Location:400 → 944
      Atrophin-1; Atrophin-1 family
    Nucleotide Protein
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