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    ZGC:110366 aldo/keto reductase [ Latimeria chalumnae (coelacanth) ]

    Gene ID: 102345892, updated on 30-Apr-2024

    Summary

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    Gene symbol
    ZGC:110366
    Gene description
    aldo/keto reductase
    See related
    Ensembl:ENSLACG00000002880
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Latimeria chalumnae
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria
    Orthologs
    zebrafish all
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    Genomic context

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    See ZGC:110366 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_04 current fLatCha1.pri (GCF_037176945.1) 6 NC_088144.1 (61941972..62088070, complement)
    101 previous assembly LatCha1 (GCF_000225785.1) Unplaced Scaffold NW_005821171.1 (62752..207956, complement)

    Chromosome 6 - NC_088144.1Genomic Context describing neighboring genes Neighboring gene sphingosine 1-phosphate receptor 1-like Neighboring gene sphingosine-1-phosphate receptor 1 Neighboring gene diphthamide biosynthesis 5 Neighboring gene solute carrier family 30 member 7

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    glyoxal reductase; uncharacterized oxidoreductase YtbE; uncharacterized oxidoreductase ZK1290.5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_037176945.1-RS_2024_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fLatCha1.pri

    Genomic

    1. NC_088144.1 Reference fLatCha1.pri

      Range
      61941972..62088070 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_064560002.1 → XP_064416072.1  uncharacterized oxidoreductase ZK1290.5 isoform X1

    2. XM_064560003.1 → XP_064416073.1  uncharacterized oxidoreductase YtbE isoform X4

    3. XM_006009909.3 → XP_006009971.1  glyoxal reductase isoform X2

      Conserved Domains (2) summary
      COG0656
      Location:14 → 300
      ARA1; Aldo/keto reductase, related to diketogulonate reductase [Secondary metabolites biosynthesis, transport and catabolism]
      COG0667
      Location:21 → 303
      Tas; Predicted oxidoreductase (related to aryl-alcohol dehydrogenase) [General function prediction only]

    4. XM_006009911.3 → XP_006009973.1  uncharacterized oxidoreductase ZK1290.5 isoform X5

      UniProtKB/TrEMBL
      H3A0Q2
      Related
      ENSLACP00000003223.1
      Conserved Domains (2) summary
      COG0656
      Location:14 → 273
      ARA1; Aldo/keto reductase, related to diketogulonate reductase [Secondary metabolites biosynthesis, transport and catabolism]
      COG0667
      Location:21 → 276
      Tas; Predicted oxidoreductase (related to aryl-alcohol dehydrogenase) [General function prediction only]

    5. XM_064560005.1 → XP_064416075.1  uncharacterized oxidoreductase YtbE isoform X7

    6. XM_006009912.3 → XP_006009974.1  uncharacterized oxidoreductase ZK1290.5 isoform X6

      UniProtKB/TrEMBL
      M3XJ28
      Related
      ENSLACP00000022734.1
      Conserved Domains (2) summary
      COG0656
      Location:14 → 287
      ARA1; Aldo/keto reductase, related to diketogulonate reductase [Secondary metabolites biosynthesis, transport and catabolism]
      COG0667
      Location:21 → 279
      Tas; Predicted oxidoreductase (related to aryl-alcohol dehydrogenase) [General function prediction only]

    7. XM_006009910.3 → XP_006009972.1  uncharacterized oxidoreductase ZK1290.5 isoform X3

      Conserved Domains (2) summary
      COG0656
      Location:14 → 314
      ARA1; Aldo/keto reductase, related to diketogulonate reductase [Secondary metabolites biosynthesis, transport and catabolism]
      COG0667
      Location:21 → 306
      Tas; Predicted oxidoreductase (related to aryl-alcohol dehydrogenase) [General function prediction only]
    Nucleotide Protein
    Heading Accession and Version

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