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    C6h14orf28 similar to human chromosome 14 open reading frame 28 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 314168, updated on 9-Dec-2024

    Summary

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    Official Symbol
    C6h14orf28provided by RGD
    Official Full Name
    similar to human chromosome 14 open reading frame 28provided by RGD
    Primary source
    RGD:1307621
    See related
    EnsemblRapid:ENSRNOG00000023230 AllianceGenome:RGD:1307621
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1307621
    Summary
    Orthologous to human C14orf28 (chromosome 14 open reading frame 28). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Testes (RPKM 68.5), Brain (RPKM 31.7) and 9 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    See C6h14orf28 in Genome Data Viewer
    Location:
    6q24
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 6 NC_086024.1 (88701651..88710204)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 6 NC_051341.1 (82965304..82973942)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 6 NC_005105.4 (86651196..86659371)

    Chromosome 6 - NC_086024.1Genomic Context describing neighboring genes Neighboring gene peptidylprolyl isomerase A, pseudogene 6 Neighboring gene eukaryotic translation initiation factor 2D, pseudogene 2 Neighboring gene kelch-like family member 28 Neighboring gene TOG array regulator of axonemal microtubules 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein C14orf28 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001108025.1 → NP_001101495.1  uncharacterized protein C14orf28 homolog

      See identical proteins and their annotated locations for NP_001101495.1

      Status: PROVISIONAL

      Source sequence(s)
      CH473947
      UniProtKB/TrEMBL
      A0A8I5ZS88, A6HBS5, D4A3H4
      Related
      ENSRNOP00000035231.7, ENSRNOT00000034756.8

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086024.1 Reference GRCr8

      Range
      88701651..88710204
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039112242.2 → XP_038968170.1  uncharacterized protein C14orf28 homolog isoform X1

      UniProtKB/TrEMBL
      A0A8I6AS79
      Related
      ENSRNOP00000096306.2, ENSRNOT00000101605.2

    2. XM_039112244.2 → XP_038968172.1  uncharacterized protein C14orf28 homolog isoform X3

    3. XM_039112243.2 → XP_038968171.1  uncharacterized protein C14orf28 homolog isoform X2

      UniProtKB/TrEMBL
      A0A8I5ZS88, A6HBS5, D4A3H4

    RNA

    1. XR_005505516.2 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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    Research Materials