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    LOC134368992 probable ubiquitin carboxyl-terminal hydrolase FAF-X [ Cynocephalus volans (Philippine flying lemur) ]

    Gene ID: 134368992, updated on 8-May-2024

    Summary

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    Gene symbol
    LOC134368992
    Gene description
    probable ubiquitin carboxyl-terminal hydrolase FAF-X
    See related
    EnsemblRapid:ENSULUG00005000367
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cynocephalus volans
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Dermoptera; Cynocephalidae; Cynocephalus
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    Genomic context

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    See LOC134368992 in Genome Data Viewer
    Location:
    chromosome: Y
    Exon count:
    47
    Annotation release Status Assembly Chr Location
    RS_2024_02 current mCynVol1.pri (GCF_027409185.1) Y NC_084479.1 (3169204..3302641)

    Chromosome Y - NC_084479.1Genomic Context describing neighboring genes Neighboring gene claudin-34-like Neighboring gene uncharacterized LOC134368959 Neighboring gene large ribosomal subunit protein eL33-like Neighboring gene ATP-dependent RNA helicase DDX3X-like Neighboring gene lysine-specific demethylase 6A-like Neighboring gene small nuclear ribonucleoprotein E-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_084479.1 Chromosome Y Reference mCynVol1.pri

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cysteine-type deubiquitinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell migration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein deubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    probable ubiquitin carboxyl-terminal hydrolase FAF-X

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_027409185.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCynVol1.pri

    Genomic

    1. NC_084479.1 Reference mCynVol1.pri

      Range
      3169204..3302641
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063085218.1 → XP_062941288.1  probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1

    2. XM_063085222.1 → XP_062941292.1  probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X3

    3. XM_063085220.1 → XP_062941290.1  probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X2

      Related
      ENSULUP00005000401.1, ENSULUT00005000491.1

    4. XM_063085223.1 → XP_062941293.1  probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X4

    5. XM_063085219.1 → XP_062941289.1  probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1

    RNA

    1. XR_010022585.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version