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    LOC5667921 H/ACA ribonucleoprotein complex non-core subunit NAF1 [ Anopheles gambiae (African malaria mosquito) ]

    Gene ID: 5667921, updated on 22-Jun-2024

    Summary

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    Gene symbol
    LOC5667921
    Gene description
    H/ACA ribonucleoprotein complex non-core subunit NAF1
    See related
    VectorBase:AGAMI1_003050
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anopheles gambiae
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
    Also known as
    AGAP011831
    Orthologs
    fruit fly all
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    Genomic context

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    See LOC5667921 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2023_12 current idAnoGambNW_F1_1 (GCF_943734735.2) 3 NC_064602.1 (91268257..91271103, complement)

    Chromosome 3 - NC_064602.1Genomic Context describing neighboring genes Neighboring gene NADH dehydrogenase (ubiquinone) B15 subunit Neighboring gene inositol-3-phosphate synthase Neighboring gene death-associated protein 1 Neighboring gene Enoyl-CoA hydratase, short chain 1 Neighboring gene enoyl-[acyl-carrier-protein] reductase, mitochondrial

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_064602.1 Chromosome 3 Reference idAnoGambNW_F1_1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in box H/ACA snoRNP assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in pseudouridine synthesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in ribosome biogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of sno(s)RNA-containing ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    H/ACA ribonucleoprotein complex non-core subunit NAF1
    Names
    AGAP011831-PA

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_943734735.2-RS_2023_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference idAnoGambNW_F1_1 Primary Assembly

    Genomic

    1. NC_064602.1 Reference idAnoGambNW_F1_1 Primary Assembly

      Range
      91268257..91271103 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001689229.2 → XP_001689281.2  H/ACA ribonucleoprotein complex non-core subunit NAF1

    Nucleotide Protein Strain
    Heading Accession and Version

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