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    Ranbp6 RAN binding protein 6 [ Mus musculus (house mouse) ]

    Gene ID: 240614, updated on 27-Nov-2024

    Summary

    Official Symbol
    Ranbp6provided by MGI
    Official Full Name
    RAN binding protein 6provided by MGI
    Primary source
    MGI:MGI:2683212
    See related
    Ensembl:ENSMUSG00000074909 AllianceGenome:MGI:2683212
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    C630001B19
    Summary
    Predicted to enable nuclear import signal receptor activity and nuclear localization sequence binding activity. Predicted to be involved in protein import into nucleus. Is active in synapse. Orthologous to human RANBP6 (RAN binding protein 6). [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
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    Genomic context

    See Ranbp6 in Genome Data Viewer
    Location:
    19 C1; 19 24.42 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 19 NC_000085.7 (29785508..29790374, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 19 NC_000085.6 (29808108..29812974, complement)

    Chromosome 19 - NC_000085.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_45893 Neighboring gene STARR-seq mESC enhancer starr_45894 Neighboring gene melan-A Neighboring gene bromodomain containing 10 Neighboring gene STARR-positive B cell enhancer ABC_E7643 Neighboring gene STARR-seq mESC enhancer starr_45896 Neighboring gene STARR-seq mESC enhancer starr_45897 Neighboring gene predicted gene, 41832 Neighboring gene predicted gene, 36209 Neighboring gene STARR-seq mESC enhancer starr_45899 Neighboring gene interleukin 33

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Clone Names

    • FLJ11120

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables nuclear import signal receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables nuclear localization sequence binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in protein import into nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in protein import into nucleus IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in synapse EXP
    Inferred from Experiment
    more info
    PubMed 
    is_active_in synapse IDA
    Inferred from Direct Assay
    more info
    PubMed 

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_177721.4NP_808389.2  ran-binding protein 6

      See identical proteins and their annotated locations for NP_808389.2

      Status: VALIDATED

      Source sequence(s)
      BC056759, BC139396, BQ561129
      Consensus CDS
      CCDS37954.1
      UniProtKB/Swiss-Prot
      Q3TTJ6, Q8BIV3
      UniProtKB/TrEMBL
      A3KMD2
      Related
      ENSMUSP00000100503.3, ENSMUST00000099525.5
      Conserved Domains (3) summary
      pfam13513
      Location:380434
      HEAT_EZ; HEAT-like repeat
      pfam13646
      Location:371474
      HEAT_2; HEAT repeats
      sd00044
      Location:330353
      HEAT; HEAT repeat [structural motif]

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000085.7 Reference GRCm39 C57BL/6J

      Range
      29785508..29790374 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)