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    zgc:173856 zgc:173856 [ Danio rerio (zebrafish) ]

    Gene ID: 561590, updated on 3-Dec-2024

    Summary

    Official Symbol
    zgc:173856provided by ZNC
    Official Full Name
    zgc:173856provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-5358
    See related
    Ensembl:ENSDARG00000045424 AllianceGenome:ZFIN:ZDB-GENE-030131-5358
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    fd14f05; fd20f07; wu:fd14f05; wu:fd20f07; wu:fy58a05
    Orthologs
    NEW
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    Genomic context

    See zgc:173856 in Genome Data Viewer
    Location:
    chromosome: 24
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 24 NC_007135.7 (10018653..10021340, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 24 NC_007135.6 (9878267..9880955, complement)

    Chromosome 24 - NC_007135.7Genomic Context describing neighboring genes Neighboring gene zgc:171750 Neighboring gene zgc:171474 Neighboring gene si:ch211-146l10.8 Neighboring gene uncharacterized LOC100538156

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General protein information

    Preferred Names
    uncharacterized protein LOC561590

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001109709.4NP_001103179.4  uncharacterized protein LOC561590 precursor

      Status: VALIDATED

      Source sequence(s)
      BX571823
      UniProtKB/TrEMBL
      A0A8M1NED9
      Related
      ENSDARP00000116912.1, ENSDART00000137250.2

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007135.7 Reference GRCz11 Primary Assembly

      Range
      10018653..10021340 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)