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    MICPUN_104615 heat shock transcription factor [ Micromonas commoda ]

    Gene ID: 8249817, updated on 16-Nov-2023

    Summary

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    Gene symbol
    MICPUN_104615
    Gene description
    heat shock transcription factor
    Locus tag
    MICPUN_104615
    Gene type
    protein coding
    RNA name
    heat shock transcription factor
    RefSeq status
    PROVISIONAL
    Organism
    Micromonas commoda (strain: RCC299)
    Lineage
    Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas
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    Genomic context

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    See MICPUN_104615 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    3
    Sequence:
    Chromosome: 16; NC_013053.1 (412526..414190)

    Chromosome 16 - NC_013053.1Genomic Context describing neighboring genes Neighboring gene predicted protein Neighboring gene autophagy-related protein 8 Neighboring gene RNA binding protein Neighboring gene predicted protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_013053.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Green evolution and dynamic adaptations revealed by genomes of the marine picoeukaryotes Micromonas. Worden AZ, et al. Science, 2009 Apr 10. PMID 19359590
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    heat shock transcription factor

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_013053.1 Reference assembly

      Range
      412526..414190
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002506693.1 → XP_002506739.1  heat shock transcription factor [Micromonas commoda]

      See identical proteins and their annotated locations for XP_002506739.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      C1EJ89
      Conserved Domains (1) summary
      smart00415
      Location:13 → 106
      HSF; heat shock factor
    Nucleotide Protein
    Heading Accession and Version

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