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    TEX51 testis expressed 51 [ Homo sapiens (human) ]

    Gene ID: 101929926, updated on 10-Dec-2024

    Summary

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    Official Symbol
    TEX51provided by HGNC
    Official Full Name
    testis expressed 51provided by HGNC
    Primary source
    HGNC:HGNC:52387
    See related
    Ensembl:ENSG00000237524 AllianceGenome:HGNC:52387
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Summary
    Predicted to be located in membrane. [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Restricted expression toward testis (RPKM 12.6) See more
    Orthologs
    mouse all
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    Genomic context

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    See TEX51 in Genome Data Viewer
    Location:
    2q14.3
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (126898890..126902097)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (127335881..127339100)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (127656466..127659673)

    Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124907882 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr2:127555119-127556318 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:127585337-127586060 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr2:127632091-127633290 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11928 Neighboring gene uncharacterized LOC105373603 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr2:127699803-127700707 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:127728541-127729508 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:127782155-127782754 Neighboring gene uncharacterized LOC105373604 Neighboring gene RNA, U7 small nuclear 182 pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See variants in ClinVar

    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    General gene information

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    Homology

    Gene Ontology Provided by GOA

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    testis-expressed protein 51

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001322244.2 → NP_001309173.1  testis-expressed protein 51 isoform 1 precursor

      Status: VALIDATED

      Source sequence(s)
      AI040972, BI461950, BI828150
      Consensus CDS
      CCDS82507.1
      UniProtKB/Swiss-Prot
      A0A1B0GUA7
      UniProtKB/TrEMBL
      A0A2R8Y5A7
      Related
      ENSP00000489776.1, ENST00000568484.6

    2. NM_001410921.1 → NP_001397850.1  testis-expressed protein 51 isoform 2 precursor

      Status: VALIDATED

      Source sequence(s)
      AC114783
      Consensus CDS
      CCDS92856.1
      UniProtKB/TrEMBL
      A0A1B0GUP2, A0A2R8Y5A7
      Related
      ENSP00000490189.1, ENST00000636457.1

    3. NM_001416075.1 → NP_001403004.1  testis-expressed protein 51 isoform 3 precursor

      Status: VALIDATED

      Source sequence(s)
      AC114783
      UniProtKB/TrEMBL
      A0A2R8Y5A7

    4. NM_001416076.1 → NP_001403005.1  testis-expressed protein 51 isoform 4 precursor

      Status: VALIDATED

      Source sequence(s)
      AC114783
      UniProtKB/TrEMBL
      A0A2R8Y5A7

    5. NM_001416077.1 → NP_001403006.1  testis-expressed protein 51 isoform 5 precursor

      Status: VALIDATED

      Source sequence(s)
      AC114783
      UniProtKB/TrEMBL
      A0A2R8Y5A7, A0A9L9PYI6
      Related
      ENSP00000516664.1, ENST00000706944.1

    6. NM_001416078.1 → NP_001403007.1  testis-expressed protein 51 isoform 6 precursor

      Status: VALIDATED

      Source sequence(s)
      AC114783
      UniProtKB/TrEMBL
      A0A2R8Y5A7

    7. NM_001416079.1 → NP_001403008.1  testis-expressed protein 51 isoform 1 precursor

      Status: VALIDATED

      Source sequence(s)
      AC114783
      UniProtKB/Swiss-Prot
      A0A1B0GUA7
      UniProtKB/TrEMBL
      A0A2R8Y5A7
      Related
      ENSP00000490030.1, ENST00000450035.5

    8. NM_001416080.1 → NP_001403009.1  testis-expressed protein 51 isoform 8 precursor

      Status: VALIDATED

      Source sequence(s)
      AC114783
      UniProtKB/TrEMBL
      A0A2R8Y5A7

    9. NM_001416081.1 → NP_001403010.1  testis-expressed protein 51 isoform 9 precursor

      Status: VALIDATED

      Source sequence(s)
      AC114783

    10. NM_001416082.1 → NP_001403011.1  testis-expressed protein 51 isoform 10 precursor

      Status: VALIDATED

      Source sequence(s)
      AC114783
      UniProtKB/TrEMBL
      A0A2R8Y5A7, A0A9L9PXS2
      Related
      ENSP00000516665.1, ENST00000706945.1

    RNA

    1. NR_136239.2 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AI040972, BI461950, BX113116
      Related
      ENST00000458326.5

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

      Range
      126898890..126902097
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011512272.2 → XP_011510574.1  testis-expressed protein 51 isoform X5

      UniProtKB/TrEMBL
      A0A2R8Y5A7

    2. XM_017003148.2 → XP_016858637.1  testis-expressed protein 51 isoform X6

      UniProtKB/TrEMBL
      A0A2R8Y5A7

    3. XM_047442880.1 → XP_047298836.1  testis-expressed protein 51 isoform X4

      UniProtKB/TrEMBL
      A0A2R8Y5A7

    4. XM_011512276.2 → XP_011510578.1  testis-expressed protein 51 isoform X8

      See identical proteins and their annotated locations for XP_011510578.1

      UniProtKB/TrEMBL
      A0A2R8Y5A7, A0A9L9PXS2
      Related
      ENSP00000494377.1, ENST00000643416.1

    5. XM_011512269.2 → XP_011510571.1  testis-expressed protein 51 isoform X1

    6. XM_011512278.2 → XP_011510580.1  testis-expressed protein 51 isoform X12

    7. XM_011512273.2 → XP_011510575.1  testis-expressed protein 51 isoform X7

    8. XM_011512270.2 → XP_011510572.1  testis-expressed protein 51 isoform X2

    9. XM_017003149.2 → XP_016858638.1  testis-expressed protein 51 isoform X11

    10. XM_047442885.1 → XP_047298841.1  testis-expressed protein 51 isoform X10

    11. XM_011512279.2 → XP_011510581.1  testis-expressed protein 51 isoform X13

    12. XM_011512271.2 → XP_011510573.1  testis-expressed protein 51 isoform X3

    13. XM_011512277.3 → XP_011510579.1  testis-expressed protein 51 isoform X9

      UniProtKB/TrEMBL
      A0A2R8Y5A7

    RNA

    1. XR_001738585.2 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060926.1 Alternate T2T-CHM13v2.0

      Range
      127335881..127339100
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_054340119.1 → XP_054196094.1  testis-expressed protein 51 isoform X5

      UniProtKB/TrEMBL
      A0A2R8Y5A7

    2. XM_054340120.1 → XP_054196095.1  testis-expressed protein 51 isoform X6

      UniProtKB/TrEMBL
      A0A2R8Y5A7

    3. XM_054340118.1 → XP_054196093.1  testis-expressed protein 51 isoform X4

      UniProtKB/TrEMBL
      A0A2R8Y5A7

    4. XM_054340122.1 → XP_054196097.1  testis-expressed protein 51 isoform X8

      UniProtKB/TrEMBL
      A0A2R8Y5A7, A0A9L9PXS2

    5. XM_054340115.1 → XP_054196090.1  testis-expressed protein 51 isoform X1

    6. XM_054340126.1 → XP_054196101.1  testis-expressed protein 51 isoform X12

    7. XM_054340121.1 → XP_054196096.1  testis-expressed protein 51 isoform X7

    8. XM_054340116.1 → XP_054196091.1  testis-expressed protein 51 isoform X2

    9. XM_054340125.1 → XP_054196100.1  testis-expressed protein 51 isoform X11

    10. XM_054340124.1 → XP_054196099.1  testis-expressed protein 51 isoform X10

    11. XM_054340127.1 → XP_054196102.1  testis-expressed protein 51 isoform X13

    12. XM_054340123.1 → XP_054196098.1  testis-expressed protein 51 isoform X9

      UniProtKB/TrEMBL
      A0A2R8Y5A7

    13. XM_054340117.1 → XP_054196092.1  testis-expressed protein 51 isoform X3

    RNA

    1. XR_008486251.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A0A1B0GUA7.1 GenPept UniProtKB/Swiss-Prot:A0A1B0GUA7

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