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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_051563.1 RefSeqGene
- Range
-
5150..22765
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001143986.2 → NP_001137458.1 transducin-like enhancer protein 6 isoform 1
See identical proteins and their annotated locations for NP_001137458.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longer variant and it encodes the longer protein (isoform 1).
- Source sequence(s)
-
AK024071, BC020206, DB059462
- Consensus CDS
-
CCDS45910.1
- UniProtKB/Swiss-Prot
- J3KMZ1, Q9H808
- Related
- ENSP00000246112.3, ENST00000246112.9
- Conserved Domains (2) summary
-
- sd00039
Location:289 → 325
- 7WD40; WD40 repeat [structural motif]
- cl29593
Location:282 → 561
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
NM_024760.3 → NP_079036.1 transducin-like enhancer protein 6 isoform 2
See identical proteins and their annotated locations for NP_079036.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks an alternate in-frame segment, in the 5' coding region and uses a downstream start codon, compared to variant 1. Isoform 2 has a shorter N-terminus, compared to isoform 1.
- Source sequence(s)
-
BC013986, BC020206, BX089956, DA013757
- Consensus CDS
-
CCDS12100.1
- UniProtKB/TrEMBL
- A0A087X0R4, Q6PJM9
- Related
- ENSP00000406893.1, ENST00000452088.5
- Conserved Domains (2) summary
-
- sd00039
Location:166 → 202
- 7WD40; WD40 repeat [structural motif]
- cl25539
Location:159 → 438
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
RNA
-
NR_138612.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) lacks central and 3' exons and has a 3' end that extends into an intron compared to variant 1. This variant is represented as non-coding because it lacks most of the coding region found in variant 1.
- Source sequence(s)
-
BC068052, HY050316
- Related
-
ENST00000482627.1
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000019.10 Reference GRCh38.p14 Primary Assembly
- Range
-
2977401..2995179
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_011528300.3 → XP_011526602.1 transducin-like enhancer protein 6 isoform X1
See identical proteins and their annotated locations for XP_011526602.1
- UniProtKB/Swiss-Prot
- J3KMZ1, Q9H808
- Conserved Domains (2) summary
-
- sd00039
Location:289 → 325
- 7WD40; WD40 repeat [structural motif]
- cl29593
Location:282 → 561
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
XM_005259645.3 → XP_005259702.1 transducin-like enhancer protein 6 isoform X1
See identical proteins and their annotated locations for XP_005259702.1
- UniProtKB/Swiss-Prot
- J3KMZ1, Q9H808
- Conserved Domains (2) summary
-
- sd00039
Location:289 → 325
- 7WD40; WD40 repeat [structural motif]
- cl29593
Location:282 → 561
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
XM_024451723.2 → XP_024307491.1 transducin-like enhancer protein 6 isoform X2
- UniProtKB/TrEMBL
- A0A087X0R4, Q6PJM9
- Conserved Domains (2) summary
-
- sd00039
Location:166 → 202
- 7WD40; WD40 repeat [structural motif]
- cl25539
Location:159 → 438
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
XM_024451722.2 → XP_024307490.1 transducin-like enhancer protein 6 isoform X2
- UniProtKB/TrEMBL
- A0A087X0R4, Q6PJM9
- Conserved Domains (2) summary
-
- sd00039
Location:166 → 202
- 7WD40; WD40 repeat [structural motif]
- cl25539
Location:159 → 438
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
XM_011528301.3 → XP_011526603.1 transducin-like enhancer protein 6 isoform X2
See identical proteins and their annotated locations for XP_011526603.1
- UniProtKB/TrEMBL
- A0A087X0R4, Q6PJM9
- Conserved Domains (2) summary
-
- sd00039
Location:166 → 202
- 7WD40; WD40 repeat [structural motif]
- cl25539
Location:159 → 438
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
XM_024451724.2 → XP_024307492.1 transducin-like enhancer protein 6 isoform X3
- Conserved Domains (2) summary
-
- sd00039
Location:116 → 152
- 7WD40; WD40 repeat [structural motif]
- cl25539
Location:109 → 388
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Alternate T2T-CHM13v2.0
Genomic
-
NC_060943.1 Alternate T2T-CHM13v2.0
- Range
-
2950897..2968675
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054322186.1 → XP_054178161.1 transducin-like enhancer protein 6 isoform X1
- UniProtKB/Swiss-Prot
- J3KMZ1, Q9H808
-
XM_054322185.1 → XP_054178160.1 transducin-like enhancer protein 6 isoform X1
- UniProtKB/Swiss-Prot
- J3KMZ1, Q9H808
-
XM_054322189.1 → XP_054178164.1 transducin-like enhancer protein 6 isoform X2
- UniProtKB/TrEMBL
- A0A087X0R4, Q6PJM9
-
XM_054322188.1 → XP_054178163.1 transducin-like enhancer protein 6 isoform X2
- UniProtKB/TrEMBL
- A0A087X0R4, Q6PJM9
-
XM_054322187.1 → XP_054178162.1 transducin-like enhancer protein 6 isoform X2
- UniProtKB/TrEMBL
- A0A087X0R4, Q6PJM9
-
XM_054322190.1 → XP_054178165.1 transducin-like enhancer protein 6 isoform X3