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    tmpoa thymopoietin a [ Ictalurus punctatus (channel catfish) ]

    Gene ID: 108279628, updated on 20-Aug-2024

    Summary

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    Gene symbol
    tmpoa
    Gene description
    thymopoietin a
    See related
    EnsemblRapid:ENSIPUG00020012534
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ictalurus punctatus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Ictaluridae; Ictalurus
    Orthologs
    zebrafish all
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    Genomic context

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    See tmpoa in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2023_03 current Coco_2.0 (GCF_001660625.3) 19 NC_030434.2 (24536134..24550189)
    101 previous assembly IpCoco_1.2 (GCF_001660625.2) 19 NC_030434.1 (21671563..21685718)

    Chromosome 19 - NC_030434.2Genomic Context describing neighboring genes Neighboring gene ethanolamine kinase 1 Neighboring gene serine/threonine kinase receptor associated protein Neighboring gene solute carrier family 25 member 3a Neighboring gene lactate dehydrogenase Ba

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Efficient assembly and annotation of the transcriptome of catfish by RNA-Seq analysis of a doubled haploid homozygote. Liu S, et al. BMC Genomics, 2012 Nov 5. PMID 23127152, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    thymopoietin a

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_001660625.3-RS_2023_03

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Coco_2.0 Primary Assembly

    Genomic

    1. NC_030434.2 Reference Coco_2.0 Primary Assembly

      Range
      24536134..24550189
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017493943.3 → XP_017349432.1  thymopoietin a isoform X1

      UniProtKB/TrEMBL
      A0A2D0T3E2
      Related
      ENSIPUP00020025184.1, ENSIPUT00020029503.1

    2. XM_017493944.3 → XP_017349433.1  thymopoietin a isoform X2

      UniProtKB/TrEMBL
      A0A2D0T3D8
      Related
      ENSIPUP00020025186.1, ENSIPUT00020029505.1

    3. XM_053688073.1 → XP_053544048.1  thymopoietin a isoform X8

      UniProtKB/TrEMBL
      A0A9F7RTY2

    4. XM_017493945.3 → XP_017349434.1  thymopoietin a isoform X3

      UniProtKB/TrEMBL
      A0A2D0T3G2
      Related
      ENSIPUP00020025140.1, ENSIPUT00020029459.1

    5. XM_047162249.2 → XP_047018205.1  thymopoietin a isoform X4

      UniProtKB/TrEMBL
      A0A979FDE1

    6. XM_017493946.3 → XP_017349435.1  thymopoietin a isoform X6

      UniProtKB/TrEMBL
      A0A2D0T4A1
      Related
      ENSIPUP00020025063.1, ENSIPUT00020029382.1

    7. XM_047162250.2 → XP_047018206.1  thymopoietin a isoform X5

      UniProtKB/TrEMBL
      A0A979FDA7
      Related
      ENSIPUP00020025113.1, ENSIPUT00020029432.1

    8. XM_017493948.3 → XP_017349437.1  thymopoietin a isoform X7

      UniProtKB/TrEMBL
      A0A2D0T3E6
      Related
      ENSIPUP00020025106.1, ENSIPUT00020029425.1

    RNA

    1. XR_008398350.1 RNA Sequence

    2. XR_008398351.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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