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    ABCC5 ATP binding cassette subfamily C member 5 [ Harpia harpyja (harpy eagle) ]

    Gene ID: 128149629, updated on 3-Aug-2024

    Summary

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    Gene symbol
    ABCC5
    Gene description
    ATP binding cassette subfamily C member 5
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Harpia harpyja
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Accipitrimorphae; Accipitriformes; Accipitridae; Accipitrinae; Harpia
    Orthologs
    human mouse all
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    Genomic context

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    See ABCC5 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    45
    Annotation release Status Assembly Chr Location
    RS_2023_02 current bHarHar1 primary haplotype (GCF_026419915.1) 12 NC_068951.1 (34191404..34265840, complement)

    Chromosome 12 - NC_068951.1Genomic Context describing neighboring genes Neighboring gene cytochrome P450 2J2-like Neighboring gene calpain 10 Neighboring gene adaptor related protein complex 2 subunit mu 1 Neighboring gene eukaryotic translation initiation factor 2B subunit epsilon Neighboring gene dishevelled segment polarity protein 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_068951.1 Chromosome 12 Reference bHarHar1 primary haplotype

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ABC-type transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables metalloaminopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ATP-binding cassette sub-family C member 5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_026419915.1-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bHarHar1 primary haplotype

    Genomic

    1. NC_068951.1 Reference bHarHar1 primary haplotype

      Range
      34191404..34265840 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_052805067.1 → XP_052661027.1  ATP-binding cassette sub-family C member 5 isoform X2

    2. XM_052805065.1 → XP_052661025.1  ATP-binding cassette sub-family C member 5 isoform X1

    3. XM_052805066.1 → XP_052661026.1  ATP-binding cassette sub-family C member 5 isoform X1

    4. XM_052805069.1 → XP_052661029.1  ATP-binding cassette sub-family C member 5 isoform X3

    5. XM_052805070.1 → XP_052661030.1  ATP-binding cassette sub-family C member 5 isoform X4

    6. XM_052805072.1 → XP_052661032.1  ATP-binding cassette sub-family C member 5 isoform X6

    7. XM_052805073.1 → XP_052661033.1  ATP-binding cassette sub-family C member 5 isoform X7

    8. XM_052805071.1 → XP_052661031.1  ATP-binding cassette sub-family C member 5 isoform X5

    RNA

    1. XR_008237713.1 RNA Sequence

    2. XR_008237714.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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