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    LOC7486902 vesicle-associated membrane protein 727 [ Populus trichocarpa (black cottonwood) ]

    Gene ID: 7486902, updated on 23-Nov-2023

    Summary

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    Gene symbol
    LOC7486902
    Gene description
    vesicle-associated membrane protein 727
    Locus tag
    POPTR_008G019400v4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Populus trichocarpa
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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    Genomic context

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    See LOC7486902 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    102 current P.trichocarpa_v4.1 (GCF_000002775.5) 8 NC_037292.2 (977140..980368)
    101 previous assembly Pop_tri_v3 (GCF_000002775.4) 8 NC_037292.1 (1031548..1034722)

    Chromosome 8 - NC_037292.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC18109808 Neighboring gene uncharacterized protein At2g38710 Neighboring gene uncharacterized LOC7490892 Neighboring gene ribonuclease H2 subunit A

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    vesicle-associated membrane protein 727

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Populus trichocarpa Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference P.trichocarpa_v4.1 Primary Assembly

    Genomic

    1. NC_037292.2 Reference P.trichocarpa_v4.1 Primary Assembly

      Range
      977140..980368
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002310970.4 → XP_002311006.1  vesicle-associated membrane protein 727

      See identical proteins and their annotated locations for XP_002311006.1

      UniProtKB/TrEMBL
      B9HKP0
      Conserved Domains (2) summary
      cd14824
      Location:8 → 140
      Longin; longin domain
      pfam00957
      Location:146 → 234
      Synaptobrevin

    2. XM_024605963.2 → XP_024461731.1  vesicle-associated membrane protein 727

      UniProtKB/TrEMBL
      B9HKP0
      Conserved Domains (2) summary
      cd14824
      Location:8 → 140
      Longin; longin domain
      pfam00957
      Location:146 → 234
      Synaptobrevin
    Nucleotide Protein
    Heading Accession and Version

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