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    LOC102620721 endoglucanase-like [ Citrus sinensis (sweet orange) ]

    Gene ID: 102620721, updated on 3-Dec-2024

    Summary

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    Gene symbol
    LOC102620721
    Gene description
    endoglucanase-like
    Locus tag
    KPL70_005781
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Citrus sinensis
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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    Genomic context

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    See LOC102620721 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current DVS_A1.0 (GCF_022201045.2) 3 NC_068558.1 (1448599..1451261)
    102 previous assembly Csi_valencia_1.0 (GCF_000317415.1) 5 NC_023050.1 (1485536..1488069)

    Chromosome 3 - NC_068558.1Genomic Context describing neighboring genes Neighboring gene E4 SUMO-protein ligase PIAL2 Neighboring gene uncharacterized LOC102611872 Neighboring gene WRKY transcription factor 22-like Neighboring gene meiotic recombination protein SPO11-2 Neighboring gene G-patch domain-containing protein 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables hydrolase activity, hydrolyzing O-glycosyl compounds IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    endoglucanase-like
    Names
    Endoglucanase 20

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Citrus sinensis Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference DVS_A1.0 Primary Assembly

    Genomic

    1. NC_068558.1 Reference DVS_A1.0 Primary Assembly

      Range
      1448599..1451261
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006477452.3 → XP_006477515.3  endoglucanase-like isoform X1

      UniProtKB/TrEMBL
      A0A067G9J1

    2. XM_052438201.1 → XP_052294161.1  endoglucanase-like isoform X2

      UniProtKB/TrEMBL
      A0A067G9J1
    Nucleotide Protein
    Heading Accession and Version

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