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    Crtc2 CREB regulated transcription coactivator 2 [ Mus musculus (house mouse) ]

    Gene ID: 74343, updated on 27-Nov-2024

    Summary

    Official Symbol
    Crtc2provided by MGI
    Official Full Name
    CREB regulated transcription coactivator 2provided by MGI
    Primary source
    MGI:MGI:1921593
    See related
    Ensembl:ENSMUSG00000027936 AllianceGenome:MGI:1921593
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Torc2; 4632407F12Rik
    Summary
    Predicted to enable cAMP response element binding protein binding activity; chromatin binding activity; and transcription coactivator activity. Involved in gluconeogenesis; glucose homeostasis; and positive regulation of CREB transcription factor activity. Acts upstream of or within positive regulation of transcription by RNA polymerase II. Located in cytoplasm and nucleus. Is expressed in several structures, including alimentary system; ear; integumental system; limb; and nervous system. Orthologous to human CRTC2 (CREB regulated transcription coactivator 2). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Ubiquitous expression in spleen adult (RPKM 33.2), thymus adult (RPKM 31.7) and 28 other tissues See more
    Orthologs
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    Genomic context

    See Crtc2 in Genome Data Viewer
    Location:
    3 F1; 3 39.21 cM
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (90161475..90171432)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (90253858..90264125)

    Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene cAMP responsive element binding protein 3-like 4 Neighboring gene jumping translocation breakpoint Neighboring gene STARR-positive B cell enhancer ABC_E1265 Neighboring gene CapStarr-seq enhancer MGSCv37_chr3:90052523-90052632 Neighboring gene CapStarr-seq enhancer MGSCv37_chr3:90057967-90058076 Neighboring gene solute carrier family 39 (zinc transporter), member 1 Neighboring gene STARR-positive B cell enhancer ABC_E4558 Neighboring gene DENN domain containing 4B Neighboring gene microRNA 7012 Neighboring gene STARR-positive B cell enhancer ABC_E28 Neighboring gene GATA zinc finger domain containing 2B Neighboring gene STARR-seq mESC enhancer starr_08281

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 
    • Targeted (7)  1 citation

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables cAMP response element binding protein binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables cAMP response element binding protein binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables chromatin binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables transcription coactivator activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in nucleoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    CREB-regulated transcription coactivator 2
    Names
    TORC-2
    transducer of CREB protein 2
    transducer of regulated cAMP response element-binding protein 2

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001357152.2NP_001344081.1  CREB-regulated transcription coactivator 2 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AC119825
      UniProtKB/TrEMBL
      Q3TDX5, Q8R1U3
      Related
      ENSMUST00000136970.8
      Conserved Domains (2) summary
      pfam12885
      Location:1138
      TORC_M; Transducer of regulated CREB activity middle domain
      pfam12886
      Location:435512
      TORC_C; Transducer of regulated CREB activity, C terminus
    2. NM_028881.4NP_083157.1  CREB-regulated transcription coactivator 2 isoform 1

      See identical proteins and their annotated locations for NP_083157.1

      Status: VALIDATED

      Source sequence(s)
      AC119825
      Consensus CDS
      CCDS38501.1
      UniProtKB/Swiss-Prot
      Q3TA52, Q3U182, Q8BH09
      Related
      ENSMUSP00000029545.9, ENSMUST00000029545.15
      Conserved Domains (3) summary
      pfam12884
      Location:1872
      TORC_N; Transducer of regulated CREB activity, N terminus
      pfam12885
      Location:168317
      TORC_M; Transducer of regulated CREB activity middle domain
      pfam12886
      Location:614691
      TORC_C; Transducer of regulated CREB activity, C terminus

    RNA

    1. NR_151631.2 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC119825

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000069.7 Reference GRCm39 C57BL/6J

      Range
      90161475..90171432
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006502153.1XP_006502216.1  CREB-regulated transcription coactivator 2 isoform X2

      Conserved Domains (3) summary
      pfam12884
      Location:1872
      TORC_N; Transducer of regulated CREB activity, N-terminus
      pfam12885
      Location:168317
      TORC_M; Transducer of regulated CREB activity middle domain
      pfam12886
      Location:526603
      TORC_C; Transducer of regulated CREB activity, C-terminus
    2. XM_006502152.1XP_006502215.1  CREB-regulated transcription coactivator 2 isoform X1

      Conserved Domains (3) summary
      pfam12884
      Location:1872
      TORC_N; Transducer of regulated CREB activity, N-terminus
      pfam12885
      Location:145294
      TORC_M; Transducer of regulated CREB activity middle domain
      pfam12886
      Location:591668
      TORC_C; Transducer of regulated CREB activity, C-terminus

    RNA

    1. XR_001783761.1 RNA Sequence

    2. XR_375593.1 RNA Sequence

      Related
      ENSMUST00000184882.2
    3. XR_004941409.1 RNA Sequence

    4. XR_001783762.1 RNA Sequence

      Related
      ENSMUST00000130002.8