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    LOC5516087 oxysterol-binding protein 1 [ Nematostella vectensis (starlet sea anemone) ]

    Gene ID: 5516087, updated on 3-Dec-2024

    Summary

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    Gene symbol
    LOC5516087
    Gene description
    oxysterol-binding protein 1
    Locus tag
    NEMVEDRAFT_v1g163524
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Nematostella vectensis
    Lineage
    Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella
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    Genomic context

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    See LOC5516087 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    101 current jaNemVect1.1 (GCF_932526225.1) 4 NC_064037.1 (15579515..15592636)
    100 previous assembly ASM20922v1 (GCF_000209225.1) Unplaced Scaffold NW_001834373.1 (287947..301238)

    Chromosome 4 - NC_064037.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116620253 Neighboring gene leucine-zipper-like transcriptional regulator 1 Neighboring gene sel1-repeat-containing protein YbeQ Neighboring gene uncharacterized LOC116620254 Neighboring gene ras-related protein Rab-3 Neighboring gene uncharacterized LOC5516091 Neighboring gene L-serine dehydratase/L-threonine deaminase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables sterol binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in intracellular membrane-bounded organelle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    oxysterol-binding protein 1
    Names
    predicted protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Nematostella vectensis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference jaNemVect1.1

    Genomic

    1. NC_064037.1 Reference jaNemVect1.1

      Range
      15579515..15592636
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_032385984.2 → XP_032241875.2  oxysterol-binding protein 1 isoform X2

      UniProtKB/TrEMBL
      A7RWH9

    2. XM_032385983.2 → XP_032241874.1  oxysterol-binding protein 1 isoform X1

      UniProtKB/TrEMBL
      A7RWH9
      Conserved Domains (2) summary
      cd13284
      Location:35 → 133
      PH_OSBP_ORP4; Human Oxysterol binding protein and OSBP-related protein 4 Pleckstrin homology (PH) domain
      pfam01237
      Location:389 → 766
      Oxysterol_BP; Oxysterol-binding protein
    Nucleotide Protein
    Heading Accession and Version

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