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    LOC8267156 cell division protein FtsZ homolog 2-1, chloroplastic [ Ricinus communis (castor bean) ]

    Gene ID: 8267156, updated on 30-Nov-2023

    Summary

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    Gene symbol
    LOC8267156
    Gene description
    cell division protein FtsZ homolog 2-1, chloroplastic
    Locus tag
    RCOM_0516810
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ricinus communis
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
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    Genomic context

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    See LOC8267156 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    102 current ASM1957865v1 (GCF_019578655.1) 10 NC_063265.1 (16302933..16324778)
    101 previous assembly JCVI_RCG_1.1 (GCF_000151685.1) Unplaced Scaffold NW_002994608.1 (154516..176127)

    Chromosome 10 - NC_063265.1Genomic Context describing neighboring genes Neighboring gene cyclin-dependent kinase F-4 Neighboring gene cyclin-dependent kinase F-4-like Neighboring gene uncharacterized LOC107262016 Neighboring gene iron-sulfur assembly protein IscA-like 1, mitochondrial Neighboring gene small nucleolar RNA U19 Neighboring gene protein BIC1 Neighboring gene protein CIA1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in chloroplast fission IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cell division protein FtsZ homolog 2-1, chloroplastic; uncharacterized protein LOC8267156

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Ricinus communis Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1957865v1

    Genomic

    1. NC_063265.1 Reference ASM1957865v1

      Range
      16302933..16324778
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015725098.2 → XP_015580584.1  uncharacterized protein LOC8267156 isoform X3

      Conserved Domains (3) summary
      PRK09330
      Location:606 → 946
      PRK09330; cell division protein FtsZ; Validated
      cd14707
      Location:348 → 402
      bZIP_plant_BZIP46; Basic leucine zipper (bZIP) domain of uncharaterized Plant BZIP transcription factors: a DNA-binding and dimerization domain
      cd02201
      Location:606 → 898
      FtsZ_type1; Filamenting temperature sensitive mutant Z, type 1

    2. XM_025159040.2 → XP_025014808.1  cell division protein FtsZ homolog 2-1, chloroplastic isoform X2

      Conserved Domains (1) summary
      PRK09330
      Location:137 → 449
      PRK09330; cell division protein FtsZ; Validated

    3. XM_002528695.4 → XP_002528741.1  cell division protein FtsZ homolog 2-1, chloroplastic isoform X1

      See identical proteins and their annotated locations for XP_002528741.1

      UniProtKB/TrEMBL
      B9SRX2
      Conserved Domains (2) summary
      PRK09330
      Location:137 → 477
      PRK09330; cell division protein FtsZ; Validated
      cd02201
      Location:137 → 429
      FtsZ_type1; Filamenting temperature sensitive mutant Z, type 1
    Nucleotide Protein
    Heading Accession and Version

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