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    LOC8274653 hexokinase-2, chloroplastic [ Ricinus communis (castor bean) ]

    Gene ID: 8274653, updated on 19-Jun-2024

    Summary

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    Gene symbol
    LOC8274653
    Gene description
    hexokinase-2, chloroplastic
    Locus tag
    RCOM_1597800
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ricinus communis
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
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    Genomic context

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    See LOC8274653 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    102 current ASM1957865v1 (GCF_019578655.1) 2 NC_063257.1 (1316643..1320312, complement)
    101 previous assembly JCVI_RCG_1.1 (GCF_000151685.1) Unplaced Scaffold NW_002994277.1 (3364224..3367780)

    Chromosome 2 - NC_063257.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC8274655 Neighboring gene AP-2 complex subunit sigma Neighboring gene WEB family protein At1g75720 Neighboring gene uncharacterized LOC8274651

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables D-glucose binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables fructokinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables glucokinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables mannokinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in glucose 6-phosphate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in glycolytic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular glucose homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    hexokinase-2, chloroplastic

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Ricinus communis Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1957865v1

    Genomic

    1. NC_063257.1 Reference ASM1957865v1

      Range
      1316643..1320312 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_025157787.2 → XP_025013555.1  hexokinase-2, chloroplastic isoform X2

      Conserved Domains (1) summary
      PLN02914
      Location:1 → 488
      PLN02914; hexokinase

    2. XM_002510480.4 → XP_002510526.1  hexokinase-2, chloroplastic isoform X1

      See identical proteins and their annotated locations for XP_002510526.1

      UniProtKB/TrEMBL
      B9R883
      Conserved Domains (3) summary
      PLN02914
      Location:1 → 491
      PLN02914; hexokinase
      pfam00349
      Location:41 → 241
      Hexokinase_1; Hexokinase
      pfam03727
      Location:247 → 486
      Hexokinase_2; Hexokinase
    Nucleotide Protein
    Heading Accession and Version

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