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    LOC105370182 uncharacterized LOC105370182 [ Homo sapiens (human) ]

    Gene ID: 105370182, updated on 10-Dec-2024

    Summary

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    Gene symbol
    LOC105370182
    Gene description
    uncharacterized LOC105370182
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See LOC105370182 in Genome Data Viewer
    Location:
    13q14.11
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 13 NC_000013.11 (43986578..44015612, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 13 NC_060937.1 (43206358..43235389, complement)

    Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 122 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5302 Neighboring gene laccase domain containing 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7670 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5303 Neighboring gene diacylglycerol kinase zeta pseudogene 1 Neighboring gene non-coding RNA in the aldehyde dehydrogenase 1A pathway Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr13:44653586-44654467 Neighboring gene long intergenic non-protein coding RNA 390 Neighboring gene SMIM2 antisense RNA 1 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr13:44715242-44716201 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5304 Neighboring gene ReSE screen-validated silencer GRCh37_chr13:44717815-44718009 Neighboring gene SMIM2 intronic transcript 1 Neighboring gene small integral membrane protein 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    NCBI Reference Sequences (RefSeq)

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    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000013.11 Reference GRCh38.p14 Primary Assembly

      Range
      43986578..44015612 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007063775.1 RNA Sequence

    2. XR_941918.3 RNA Sequence

    3. XR_007063774.1 RNA Sequence

    4. XR_007063776.1 RNA Sequence

    5. XR_941920.3 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060937.1 Alternate T2T-CHM13v2.0

      Range
      43206358..43235389 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007084060.1 RNA Sequence

    2. XR_007084058.1 RNA Sequence

    3. XR_007084059.1 RNA Sequence

    4. XR_007084062.1 RNA Sequence

    5. XR_007084061.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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