The following sections contain reference sequences that belong to a specific genome build. Explain

This section includes genomic Reference Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate assemblies. Model RNAs and proteins are also reported here.

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

1. NC_052572.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

   Range

   46370811..46409153 complement

   Download

   GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

1. XM_004949271.5 → XP_004949328.1  3'-5' RNA helicase YTHDC2 isoform X1

   Conserved Domains (9) summary

   cd06007
   Location:57 → 115

   R3H_DEXH_helicase; R3H domain of a group of proteins which also contain a DEXH-box helicase domain, and may function as ATP-dependent DNA or RNA helicases. The name of the R3H domain comes from the characteristic spacing of the most conserved arginine and histidine ...

   smart00847
   Location:827 → 912

   HA2; Helicase associated domain (HA2) Add an annotation

   cd00046
   Location:221 → 360

   DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.

   cd00204
   Location:498 → 583

   ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...

   pfam00271
   Location:621 → 753

   Helicase_C; Helicase conserved C-terminal domain

   pfam04146
   Location:1296 → 1411

   YTH; YT521-B-like domain

   pfam07717
   Location:950 → 1077

   OB_NTP_bind; Oligonucleotide/oligosaccharide-binding (OB)-fold

   pfam13637
   Location:520 → 570

   Ank_4; Ankyrin repeats (many copies)

   sd00045
   Location:516 → 548

   ANK; ANK repeat [structural motif]

2. XM_025144921.3 → XP_025000689.1  3'-5' RNA helicase YTHDC2 isoform X2

   UniProtKB/TrEMBL

   A0A8V0Y1J8

   Related

   ENSGALP00010011264.1, ENSGALT00010019716.1

   Conserved Domains (4) summary

   cd06007
   Location:57 → 115

   R3H_DEXH_helicase; R3H domain of a group of proteins which also contain a DEXH-box helicase domain, and may function as ATP-dependent DNA or RNA helicases. The name of the R3H domain comes from the characteristic spacing of the most conserved arginine and histidine ...

   COG1643
   Location:200 → 1019

   HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]

   sd00045
   Location:516 → 548

   ANK; ANK repeat [structural motif]

   pfam04146
   Location:1295 → 1426

   YTH; YT521-B-like domain

RNA

1. XR_005842652.2 RNA Sequence

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

1. NC_059536.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

   Range

   46370811..46409153 complement

   Download

   GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

1. XM_046935849.1 → XP_046791805.1  3'-5' RNA helicase YTHDC2 isoform X1

2. XM_046935850.1 → XP_046791806.1  3'-5' RNA helicase YTHDC2 isoform X2

   UniProtKB/TrEMBL

   A0A8V0Y1J8

RNA

1. XR_006937577.1 RNA Sequence