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    LOC122817693 long-chain-fatty-acid--CoA ligase ACSBG2-like [ Protopterus annectens (West African lungfish) ]

    Gene ID: 122817693, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC122817693
    Gene description
    long-chain-fatty-acid--CoA ligase ACSBG2-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Protopterus annectens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Dipnomorpha; Ceratodontiformes; Lepidosirenoidei; Protopteridae; Protopterus
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    Genomic context

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    See LOC122817693 in Genome Data Viewer
    Location:
    chromosome: 13.part0
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    100 current PAN1.0 (GCF_019279795.1) 13.part0 NC_056747.1 (185624712..186019280)

    Chromosome 13.part0 - NC_056747.1Genomic Context describing neighboring genes Neighboring gene MPV17 mitochondrial inner membrane protein like 2 Neighboring gene regulatory factor X2 Neighboring gene MLLT1 super elongation complex subunit Neighboring gene alkaline ceramidase 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_056747.1 Chromosome 13.part0 Reference PAN1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Salamander-like tail regeneration in the West African lungfish. Verissimo KM, et al. Proc Biol Sci, 2020 Sep 30. PMID 32933441, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables long-chain fatty acid-CoA ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    long-chain-fatty-acid--CoA ligase ACSBG2-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Protopterus annectens Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference PAN1.0 Primary Assembly

    Genomic

    1. NC_056747.1 Reference PAN1.0 Primary Assembly

      Range
      185624712..186019280
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_044090763.1 → XP_043946698.1  long-chain-fatty-acid--CoA ligase ACSBG2-like

      Conserved Domains (1) summary
      cd05933
      Location:121 → 716
      ACSBG_like; Bubblegum-like very long-chain fatty acid CoA synthetase (VL-FACS)
    Nucleotide Protein
    Heading Accession and Version

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