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    LOC119852298 uncharacterized LOC119852298 [ Dermochelys coriacea (leatherback sea turtle) ]

    Gene ID: 119852298, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC119852298
    Gene description
    uncharacterized LOC119852298
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Dermochelys coriacea
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Dermochelyidae; Dermochelys
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    Genomic context

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    See LOC119852298 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    101 current rDerCor1.pri.v4 (GCF_009764565.3) 2 NC_050069.1 (3812314..3815503, complement)
    100 previous assembly rDerCor1.pri.v3 (GCF_009764565.2) 2 NC_050069.1 (3812314..3815594, complement)

    Chromosome 2 - NC_050069.1Genomic Context describing neighboring genes Neighboring gene major facilitator superfamily domain containing 3 Neighboring gene RecQ like helicase 4 Neighboring gene leucine rich repeat containing 14 Neighboring gene leucine rich repeat containing 24 Neighboring gene chromosome 2 C8orf82 homolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein polyubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of SCF ubiquitin ligase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC119852298

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Dermochelys coriacea Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference rDerCor1.pri.v4

    Genomic

    1. NC_050069.1 Reference rDerCor1.pri.v4

      Range
      3812314..3815503 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038393499.2 → XP_038249427.1  uncharacterized protein LOC119852298

      Conserved Domains (1) summary
      pfam12937
      Location:50 → 91
      F-box-like

    2. XM_038393501.2 → XP_038249429.1  uncharacterized protein LOC119852298

      Conserved Domains (1) summary
      pfam12937
      Location:50 → 91
      F-box-like
    Nucleotide Protein
    Heading Accession and Version

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