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    UBXN1 UBX domain protein 1 [ Panthera tigris (tiger) ]

    Gene ID: 102970357, updated on 15-Nov-2024

    Summary

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    Gene symbol
    UBXN1
    Gene description
    UBX domain protein 1
    See related
    Ensembl:ENSPTIG00000008345
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Panthera tigris
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera
    Orthologs
    human mouse all
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    Genomic context

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    See UBXN1 in Genome Data Viewer
    Location:
    chromosome: D1
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    102 current P.tigris_Pti1_mat1.1 (GCF_018350195.1) D1 NC_056669.1 (105557430..105560087, complement)
    101 previous assembly PanTig1.0 (GCF_000464555.1) Unplaced Scaffold NW_006712076.1 (3725427..3727864)

    Chromosome D1 - NC_056669.1Genomic Context describing neighboring genes Neighboring gene citrate synthase lysine methyltransferase Neighboring gene LBH domain containing 1 Neighboring gene ubiquinol-cytochrome-c reductase complex assembly factor 3 Neighboring gene LRRN4 C-terminal like Neighboring gene BSCL2 lipid droplet biogenesis associated, seipin Neighboring gene G protein subunit gamma 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    UBX domain-containing protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Panthera tigris Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference P.tigris_Pti1_mat1.1 Primary Assembly

    Genomic

    1. NC_056669.1 Reference P.tigris_Pti1_mat1.1 Primary Assembly

      Range
      105557430..105560087 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_042958091.1 → XP_042814025.1  UBX domain-containing protein 1

      UniProtKB/TrEMBL
      A0A8C9JLC7, A0A8C9JNL5
      Conserved Domains (2) summary
      cd14302
      Location:5 → 45
      UBA_UBXN1; UBA domain found in UBX domain-containing protein 1 (UBXN1) and similar proteins
      cd01772
      Location:207 → 291
      UBX_UBXN1; Ubiquitin regulatory domain X (UBX) found in UBX domain protein 1 (UBXN1) and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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