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    S100A13 S100 calcium binding protein A13 [ Panthera leo (lion) ]

    Gene ID: 122212293, updated on 22-Mar-2024

    Summary

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    Gene symbol
    S100A13
    Gene description
    S100 calcium binding protein A13
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Panthera leo
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera
    Orthologs
    human mouse all
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    Genomic context

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    See S100A13 in Genome Data Viewer
    Location:
    chromosome: F3
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    100 current P.leo_Ple1_pat1.1 (GCF_018350215.1) F3 NC_056696.1 (69212012..69218848)

    Chromosome F3 - NC_056696.1Genomic Context describing neighboring genes Neighboring gene chromatin target of PRMT1 Neighboring gene S100 calcium binding protein A1 Neighboring gene U6 spliceosomal RNA Neighboring gene S100 calcium binding protein A14 Neighboring gene S100 calcium binding protein A16

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_056696.1 Chromosome F3 Reference P.leo_Ple1_pat1.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RAGE receptor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of canonical NF-kappaB signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of cell population proliferation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in perinuclear region of cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein S100-A13

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Panthera leo Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference P.leo_Ple1_pat1.1 Primary Assembly

    Genomic

    1. NC_056696.1 Reference P.leo_Ple1_pat1.1 Primary Assembly

      Range
      69212012..69218848
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_042926083.1 → XP_042782017.1  protein S100-A13

      UniProtKB/TrEMBL
      A0A8C8X8Q4
      Conserved Domains (1) summary
      cd05022
      Location:7 → 96
      S-100A13; S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which ...
    Nucleotide Protein
    Heading Accession and Version

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