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    Ring1 ring finger protein 1 [ Peromyscus maniculatus bairdii (prairie deer mouse) ]

    Gene ID: 102917016, updated on 10-Mar-2024

    Summary

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    Gene symbol
    Ring1
    Gene description
    ring finger protein 1
    See related
    Ensembl:ENSPEMG00000019238
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Peromyscus maniculatus bairdii (sub-species: bairdii)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Neotominae; Peromyscus
    Orthologs
    human mouse all
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    Genomic context

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    See Ring1 in Genome Data Viewer
    Location:
    chromosome: 21
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    102 current HU_Pman_2.1.3 (GCF_003704035.1) 21 NC_056028.1 (3741027..3744440)
    101 previous assembly Pman_1.0 (GCF_000500345.1) Unplaced Scaffold NW_006502262.1 (276472..280063)

    Chromosome 21 - NC_056028.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107400061 Neighboring gene solute carrier family 39 member 7 Neighboring gene hydroxysteroid 17-beta dehydrogenase 8 Neighboring gene H-2 class I histocompatibility antigen, D-P alpha chain-like Neighboring gene H-2 class I histocompatibility antigen, L-D alpha chain-like Neighboring gene U6 spliceosomal RNA Neighboring gene VPS52 subunit of GARP complex

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables chromatin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin protein ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of PcG protein complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of ubiquitin ligase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    E3 ubiquitin-protein ligase RING1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Peromyscus maniculatus bairdii Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference HU_Pman_2.1.3 Primary Assembly

    Genomic

    1. NC_056028.1 Reference HU_Pman_2.1.3 Primary Assembly

      Range
      3741027..3744440
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_042265949.1 → XP_042121883.1  E3 ubiquitin-protein ligase RING1

      UniProtKB/TrEMBL
      A0A6I9MLB2, A0A8C8TY32
      Conserved Domains (2) summary
      cd16739
      Location:47 → 90
      RING-HC_RING1; RING finger, HC subclass, found in really interesting new gene 1 protein (RING1) and similar proteins
      cd17166
      Location:261 → 400
      RAWUL_RING1; RING finger- and WD40-associated ubiquitin-like (RAWUL) domain found in really interesting new gene 1 protein (RING1)
    Nucleotide Protein
    Heading Accession and Version

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